MSR1 29023

Name: MSR1	Sequence: fasta or formatted (358aa)		NCBI GI: 4505259
Description: macrophage scavenger receptor 1 isoform type 2		Referenced in: Macrophages and Monocytes Additional Membrane Functions
Other entries for this name: alt prot [451aa] macrophage scavenger receptor 1 isoform type 1 alt prot [388aa] macrophage scavenger receptor 1 isoform type 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 16 2 C cysteine 0.6 2 1 D aspartate 4.7 17 1 E glutamate 8.4 30 3 F phenylalanine 3.6 13 1 G glycine 8.9 32 1 H histidine 2.5 9 1 I isoleucine 6.1 22 1 K lysine 6.1 22 1 L leucine 10.3 37 2 M methionine 3.1 11 1 N asparagine 6.7 24 2 P proline 5.9 21 2 Q glutamine 6.1 22 2 R arginine 3.9 14 1 S serine 7.8 28 2 T threonine 5.3 19 2 V valine 3.6 13 1 W tryptophan 0.8 3 1 Y tyrosine 0.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 macrophage scavenger receptor 1 isoform type 2 MSR1 0.963 macrophage scavenger receptor 1 isoform type 1 [Homo... MSR1 0.958 macrophage scavenger receptor 1 isoform type 3 [Homo... SCARA5 0.159 scavenger receptor class A, member 5 COLEC12 0.121 collectin sub-family member 12 SCARA3 0.095 scavenger receptor class A, member 3 isoform 1 [Homo... COL7A1 0.093 alpha 1 type VII collagen precursor COL1A1 0.089 alpha 1 type I collagen preproprotein COL19A1 0.088 alpha 1 type XIX collagen precursor COL11A2 0.085 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.085 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.085 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL5A2 0.085 alpha 2 type V collagen preproprotein COL11A1 0.085 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.085 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.085 alpha 1 type XI collagen isoform A preproprotein [Ho... COL5A1 0.085 alpha 1 type V collagen preproprotein COL9A2 0.082 alpha 2 type IX collagen COL23A1 0.082 collagen, type XXIII, alpha 1 COL2A1 0.082 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.082 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL4A5 0.082 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.082 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.082 type IV collagen alpha 5 isoform 3 precursor COL10A1 0.080 type X collagen alpha 1 precursor COL9A3 0.080 alpha 3 type IX collagen COL20A1 0.080 collagen, type XX, alpha 1 COL25A1 0.080 collagen, type XXV, alpha 1 isoform 1 COL25A1 0.080 collagen, type XXV, alpha 1 isoform 2 COL3A1 0.079 collagen type III alpha 1 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.