COL11A2 838

Name: COL11A2	Sequence: fasta or formatted (1650aa)		NCBI GI: 111118972
Description: collagen, type XI, alpha 2 isoform 2 preproprotein		Referenced in: Collagen
Other entries for this name: alt prot [1629aa] collagen, type XI, alpha 2 isoform 3 preproprotein alt prot [1736aa] collagen, type XI, alpha 2 isoform 1 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 92 2 C cysteine 0.8 14 1 D aspartate 4.2 70 2 E glutamate 6.0 99 4 F phenylalanine 1.8 30 1 G glycine 25.4 419 3 H histidine 1.2 19 1 I isoleucine 1.8 30 2 K lysine 4.4 72 2 L leucine 6.5 107 5 M methionine 0.9 15 1 N asparagine 0.9 15 1 P proline 17.5 289 2 Q glutamine 5.0 83 3 R arginine 6.0 99 2 S serine 3.8 62 2 T threonine 3.0 49 1 V valine 4.4 72 2 W tryptophan 0.2 3 1 Y tyrosine 0.7 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.985 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.970 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL11A1 0.693 alpha 1 type XI collagen isoform C preproprotein [Ho... COL5A1 0.676 alpha 1 type V collagen preproprotein COL11A1 0.664 alpha 1 type XI collagen isoform A preproprotein [Ho... COL11A1 0.634 alpha 1 type XI collagen isoform B preproprotein [Ho... COL5A3 0.532 collagen, type V, alpha 3 preproprotein COL2A1 0.324 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.323 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL1A1 0.318 alpha 1 type I collagen preproprotein COL5A2 0.313 alpha 2 type V collagen preproprotein COL3A1 0.308 collagen type III alpha 1 preproprotein COL1A2 0.285 alpha 2 type I collagen COL4A5 0.276 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.275 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.274 type IV collagen alpha 5 isoform 3 precursor COL27A1 0.262 collagen, type XXVII, alpha 1 COL7A1 0.258 alpha 1 type VII collagen precursor COL22A1 0.253 collagen, type XXII, alpha 1 COL4A1 0.251 alpha 1 type IV collagen preproprotein COL4A3 0.248 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.248 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.248 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.248 alpha 3 type IV collagen isoform 1 precursor COL4A4 0.245 alpha 4 type IV collagen precursor COL24A1 0.241 collagen, type XXIV, alpha 1 COL4A2 0.230 alpha 2 type IV collagen preproprotein COL4A6 0.223 type IV alpha 6 collagen isoform A precursor COL4A6 0.223 type IV alpha 6 collagen isoform B precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.