COLEC12 9926

Name: COLEC12	Sequence: fasta or formatted (742aa)		NCBI GI: 18641360
Description: collectin sub-family member 12		Referenced in: Additional Membrane Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 32 2 C cysteine 1.3 10 1 D aspartate 6.1 45 2 E glutamate 6.5 48 4 F phenylalanine 2.8 21 1 G glycine 10.0 74 2 H histidine 1.5 11 2 I isoleucine 4.3 32 2 K lysine 6.9 51 2 L leucine 9.4 70 2 M methionine 1.8 13 1 N asparagine 7.0 52 2 P proline 6.9 51 2 Q glutamine 7.1 53 2 R arginine 3.8 28 1 S serine 6.1 45 2 T threonine 7.0 52 2 V valine 4.3 32 2 W tryptophan 1.3 10 1 Y tyrosine 1.6 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 collectin sub-family member 12 SCARA3 0.217 scavenger receptor class A, member 3 isoform 1 [Homo... SCARA3 0.114 scavenger receptor class A, member 3 isoform 2 [Homo... SFTPD 0.103 pulmonary surfactant-associated protein D precursor ... COL16A1 0.100 alpha 1 type XVI collagen precursor COL5A1 0.098 alpha 1 type V collagen preproprotein COL3A1 0.097 collagen type III alpha 1 preproprotein COL11A1 0.096 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.096 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.096 alpha 1 type XI collagen isoform A preproprotein [Ho... COL22A1 0.095 collagen, type XXII, alpha 1 COL2A1 0.095 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.095 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL4A3 0.094 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.094 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.094 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.094 alpha 3 type IV collagen isoform 1 precursor COL1A1 0.094 alpha 1 type I collagen preproprotein COL5A2 0.094 alpha 2 type V collagen preproprotein COL5A3 0.093 collagen, type V, alpha 3 preproprotein COL7A1 0.091 alpha 1 type VII collagen precursor COL10A1 0.091 type X collagen alpha 1 precursor COL23A1 0.091 collagen, type XXIII, alpha 1 COL11A2 0.091 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.091 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.091 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL1A2 0.091 alpha 2 type I collagen COL27A1 0.091 collagen, type XXVII, alpha 1 COL4A5 0.090 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.090 type IV collagen alpha 5 isoform 3 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.