COL4A5 6476

Name: COL4A5	Sequence: fasta or formatted (1691aa)		NCBI GI: 15890086
Description: type IV collagen alpha 5 isoform 2 precursor		Referenced in: Collagen
Other entries for this name: alt prot [1688aa] type IV collagen alpha 5 isoform 3 precursor alt prot [1685aa] type IV collagen alpha 5 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.8 47 3 C cysteine 1.2 20 1 D aspartate 3.2 54 2 E glutamate 3.6 61 2 F phenylalanine 2.5 42 1 G glycine 28.4 480 4 H histidine 0.8 13 1 I isoleucine 4.1 69 3 K lysine 4.7 80 1 L leucine 6.6 112 2 M methionine 1.5 26 2 N asparagine 1.9 32 2 P proline 23.2 392 2 Q glutamine 4.4 74 1 R arginine 2.2 37 2 S serine 3.8 64 2 T threonine 2.3 39 2 V valine 1.8 31 2 W tryptophan 0.3 5 1 Y tyrosine 0.8 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.997 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.995 type IV collagen alpha 5 isoform 1 precursor COL4A1 0.565 alpha 1 type IV collagen preproprotein COL4A3 0.478 alpha 3 type IV collagen isoform 1 precursor COL4A3 0.443 alpha 3 type IV collagen isoform 2 precursor COL4A6 0.412 type IV alpha 6 collagen isoform B precursor COL4A6 0.411 type IV alpha 6 collagen isoform A precursor COL4A3 0.400 alpha 3 type IV collagen isoform 4 precursor COL4A2 0.389 alpha 2 type IV collagen preproprotein COL4A3 0.378 alpha 3 type IV collagen isoform 5 precursor COL4A4 0.339 alpha 4 type IV collagen precursor COL7A1 0.298 alpha 1 type VII collagen precursor COL5A1 0.243 alpha 1 type V collagen preproprotein COL22A1 0.242 collagen, type XXII, alpha 1 COL3A1 0.238 collagen type III alpha 1 preproprotein COL5A2 0.237 alpha 2 type V collagen preproprotein COL2A1 0.235 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL11A2 0.234 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.234 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL2A1 0.234 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL11A2 0.234 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL5A3 0.232 collagen, type V, alpha 3 preproprotein COL11A1 0.231 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.231 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.231 alpha 1 type XI collagen isoform A preproprotein [Ho... COL1A1 0.229 alpha 1 type I collagen preproprotein COL1A2 0.222 alpha 2 type I collagen COL16A1 0.217 alpha 1 type XVI collagen precursor COL27A1 0.214 collagen, type XXVII, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.