COL11A2 837

Name: COL11A2	Sequence: fasta or formatted (1736aa)		NCBI GI: 111118970
Description: collagen, type XI, alpha 2 isoform 1 preproprotein		Referenced in: Collagen
Other entries for this name: alt prot [1629aa] collagen, type XI, alpha 2 isoform 3 preproprotein alt prot [1650aa] collagen, type XI, alpha 2 isoform 2 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 98 3 C cysteine 0.8 14 1 D aspartate 4.6 79 2 E glutamate 6.3 110 4 F phenylalanine 1.8 31 1 G glycine 24.7 428 3 H histidine 1.2 20 1 I isoleucine 1.7 30 2 K lysine 4.1 72 2 L leucine 6.4 111 5 M methionine 0.9 16 1 N asparagine 0.9 15 1 P proline 17.2 299 2 Q glutamine 5.0 87 3 R arginine 5.8 101 2 S serine 3.7 65 2 T threonine 3.5 60 2 V valine 4.3 74 2 W tryptophan 0.2 3 1 Y tyrosine 1.3 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL11A2 0.921 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.793 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL5A1 0.676 alpha 1 type V collagen preproprotein COL11A1 0.665 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.664 alpha 1 type XI collagen isoform A preproprotein [Ho... COL11A1 0.663 alpha 1 type XI collagen isoform B preproprotein [Ho... COL5A3 0.509 collagen, type V, alpha 3 preproprotein COL2A1 0.308 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.307 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL1A1 0.302 alpha 1 type I collagen preproprotein COL5A2 0.298 alpha 2 type V collagen preproprotein COL3A1 0.292 collagen type III alpha 1 preproprotein COL1A2 0.270 alpha 2 type I collagen COL4A5 0.262 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.261 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.260 type IV collagen alpha 5 isoform 3 precursor COL27A1 0.255 collagen, type XXVII, alpha 1 COL7A1 0.246 alpha 1 type VII collagen precursor COL4A1 0.238 alpha 1 type IV collagen preproprotein COL4A3 0.236 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.236 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.236 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.236 alpha 3 type IV collagen isoform 1 precursor COL4A4 0.233 alpha 4 type IV collagen precursor COL22A1 0.230 collagen, type XXII, alpha 1 COL24A1 0.229 collagen, type XXIV, alpha 1 COL4A2 0.219 alpha 2 type IV collagen preproprotein COL4A6 0.211 type IV alpha 6 collagen isoform A precursor COL4A6 0.211 type IV alpha 6 collagen isoform B precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.