MSR1 12040

Name: MSR1	Sequence: fasta or formatted (451aa)		NCBI GI: 20357512
Description: macrophage scavenger receptor 1 isoform type 1		Referenced in: Macrophages and Monocytes Additional Membrane Functions
Other entries for this name: alt prot [388aa] macrophage scavenger receptor 1 isoform type 3 alt prot [358aa] macrophage scavenger receptor 1 isoform type 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 20 2 C cysteine 1.8 8 1 D aspartate 4.2 19 2 E glutamate 8.4 38 3 F phenylalanine 3.8 17 1 G glycine 10.2 46 2 H histidine 2.9 13 1 I isoleucine 5.8 26 1 K lysine 5.5 25 1 L leucine 9.1 41 2 M methionine 2.4 11 1 N asparagine 5.5 25 2 P proline 5.1 23 2 Q glutamine 5.8 26 2 R arginine 4.4 20 1 S serine 7.5 34 2 T threonine 5.5 25 2 V valine 5.1 23 2 W tryptophan 1.6 7 1 Y tyrosine 0.9 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 macrophage scavenger receptor 1 isoform type 1 [Homo... MSR1 0.761 macrophage scavenger receptor 1 isoform type 3 [Homo... MSR1 0.746 macrophage scavenger receptor 1 isoform type 2 SCARA5 0.261 scavenger receptor class A, member 5 MARCO 0.148 macrophage receptor with collagenous structure PRSS12 0.117 neurotrypsin precursor CD163 0.109 CD163 antigen isoform b CD163 0.109 CD163 antigen isoform a LOXL4 0.106 lysyl oxidase-like 4 precursor LOC284297 0.104 hypothetical protein LOC284297 CD163L1 0.100 scavenger receptor cysteine-rich type 1 precursor [H... LOXL3 0.094 lysyl oxidase-like 3 precursor COLEC12 0.094 collectin sub-family member 12 SRCRB4D 0.092 scavenger receptor cysteine rich domain containing, ... LGALS3BP 0.091 galectin 3 binding protein LOXL2 0.090 lysyl oxidase-like 2 precursor LOC100291777 0.089 PREDICTED: similar to DMBT1 isoform 1 LOC100291777 0.089 PREDICTED: similar to DMBT1 isoform 2 DMBT1 0.089 deleted in malignant brain tumors 1 isoform c precu... DMBT1 0.089 deleted in malignant brain tumors 1 isoform b precu... DMBT1 0.089 deleted in malignant brain tumors 1 isoform a precu... LOC651581 0.087 PREDICTED: hypothetical protein CD5L 0.082 CD5 molecule-like HHIPL1 0.077 HHIP-like protein 1 isoform a SCARA3 0.075 scavenger receptor class A, member 3 isoform 1 [Homo... COL7A1 0.071 alpha 1 type VII collagen precursor COL5A1 0.070 alpha 1 type V collagen preproprotein COL1A1 0.069 alpha 1 type I collagen preproprotein COL19A1 0.069 alpha 1 type XIX collagen precursor CD6 0.068 CD6 molecule Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.