COL5A2 37122

Name: COL5A2	Sequence: fasta or formatted (1499aa)		NCBI GI: 89363017
Description: alpha 2 type V collagen preproprotein		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 83 2 C cysteine 1.1 17 2 D aspartate 4.6 69 2 E glutamate 5.1 76 2 F phenylalanine 1.3 20 1 G glycine 26.8 402 3 H histidine 1.1 17 1 I isoleucine 2.6 39 2 K lysine 4.1 61 2 L leucine 4.1 62 2 M methionine 1.6 24 2 N asparagine 2.4 36 1 P proline 18.0 270 2 Q glutamine 4.0 60 2 R arginine 4.9 74 1 S serine 4.2 63 2 T threonine 3.4 51 2 V valine 3.9 58 2 W tryptophan 0.4 6 2 Y tyrosine 0.7 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 2 type V collagen preproprotein COL2A1 0.632 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.606 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL1A1 0.560 alpha 1 type I collagen preproprotein COL3A1 0.504 collagen type III alpha 1 preproprotein COL1A2 0.480 alpha 2 type I collagen COL11A1 0.366 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.366 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.366 alpha 1 type XI collagen isoform A preproprotein [Ho... COL5A1 0.362 alpha 1 type V collagen preproprotein COL5A3 0.341 collagen, type V, alpha 3 preproprotein COL11A2 0.340 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.340 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.340 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL4A5 0.292 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.292 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.291 type IV collagen alpha 5 isoform 3 precursor COL27A1 0.290 collagen, type XXVII, alpha 1 COL7A1 0.285 alpha 1 type VII collagen precursor COL4A3 0.274 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.274 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.274 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.274 alpha 3 type IV collagen isoform 1 precursor COL4A1 0.274 alpha 1 type IV collagen preproprotein COL4A4 0.272 alpha 4 type IV collagen precursor COL24A1 0.266 collagen, type XXIV, alpha 1 COL22A1 0.259 collagen, type XXII, alpha 1 COL4A2 0.252 alpha 2 type IV collagen preproprotein COL4A6 0.252 type IV alpha 6 collagen isoform A precursor COL4A6 0.252 type IV alpha 6 collagen isoform B precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.