COL9A3 2332

Name: COL9A3	Sequence: fasta or formatted (684aa)		NCBI GI: 119508426
Description: alpha 3 type IX collagen		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 45 3 C cysteine 0.9 6 1 D aspartate 4.1 28 1 E glutamate 4.7 32 1 F phenylalanine 0.6 4 1 G glycine 30.7 210 2 H histidine 0.6 4 1 I isoleucine 2.0 14 1 K lysine 4.2 29 1 L leucine 7.2 49 7 M methionine 0.9 6 1 N asparagine 0.7 5 1 P proline 20.0 137 2 Q glutamine 3.7 25 1 R arginine 4.7 32 1 S serine 3.7 25 2 T threonine 1.6 11 1 V valine 2.9 20 1 W tryptophan 0.0 0 0 Y tyrosine 0.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 3 type IX collagen COL9A1 0.446 alpha 1 type IX collagen isoform 2 precursor COL9A2 0.446 alpha 2 type IX collagen COL9A1 0.440 alpha 1 type IX collagen isoform 1 precursor LOC100293055 0.358 PREDICTED: similar to COL22A1 protein COL5A1 0.357 alpha 1 type V collagen preproprotein COL2A1 0.353 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL4A5 0.351 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.351 type IV collagen alpha 5 isoform 3 precursor COL2A1 0.351 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL4A5 0.351 type IV collagen alpha 5 isoform 2 precursor COL11A1 0.350 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.350 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.350 alpha 1 type XI collagen isoform A preproprotein [Ho... COL22A1 0.349 collagen, type XXII, alpha 1 COL3A1 0.349 collagen type III alpha 1 preproprotein COL1A1 0.345 alpha 1 type I collagen preproprotein COL5A3 0.345 collagen, type V, alpha 3 preproprotein COL11A2 0.341 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.341 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.341 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL5A2 0.340 alpha 2 type V collagen preproprotein COL4A4 0.338 alpha 4 type IV collagen precursor COL16A1 0.336 alpha 1 type XVI collagen precursor COL1A2 0.334 alpha 2 type I collagen COL27A1 0.334 collagen, type XXVII, alpha 1 COL7A1 0.330 alpha 1 type VII collagen precursor COL4A1 0.329 alpha 1 type IV collagen preproprotein COL4A3 0.322 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.322 alpha 3 type IV collagen isoform 4 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.