CAPN2 6202

Name: CAPN2	Sequence: fasta or formatted (700aa)		NCBI GI: 157389005
Description: calpain 2 isoform 1		Referenced in: Cysteine Proteases
Other entries for this name: alt prot [622aa] calpain 2 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 46 2 C cysteine 2.1 15 1 D aspartate 6.9 48 2 E glutamate 9.7 68 3 F phenylalanine 5.7 40 2 G glycine 7.3 51 2 H histidine 1.4 10 1 I isoleucine 6.9 48 2 K lysine 5.9 41 2 L leucine 9.6 67 2 M methionine 1.6 11 1 N asparagine 3.9 27 1 P proline 3.4 24 3 Q glutamine 3.7 26 1 R arginine 5.9 41 3 S serine 5.7 40 2 T threonine 5.1 36 2 V valine 3.6 25 3 W tryptophan 2.3 16 1 Y tyrosine 2.9 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 2 isoform 1 CAPN2 0.887 calpain 2 isoform 2 CAPN1 0.658 calpain 1, large subunit CAPN8 0.635 calpain 8 CAPN11 0.539 calpain 11 CAPN3 0.505 calpain 3 isoform c CAPN9 0.497 calpain 9 isoform 1 CAPN3 0.480 calpain 3 isoform b CAPN3 0.479 calpain 3 isoform a CAPN9 0.470 calpain 9 isoform 2 CAPN3 0.462 calpain 3 isoform f CAPN12 0.374 calpain 12 CAPN14 0.312 calpain 14 CAPN5 0.226 calpain 5 CAPN13 0.203 calpain 13 CAPN6 0.191 calpain 6 CAPN3 0.148 calpain 3 isoform d CAPN10 0.138 calpain 10 isoform a CAPN10 0.132 calpain 10 isoform c CAPNS1 0.110 calpain, small subunit 1 CAPNS1 0.110 calpain, small subunit 1 CAPNS2 0.103 calpain small subunit 2 CAPN3 0.095 calpain 3 isoform e CAPN3 0.095 calpain 3 isoform e SOLH 0.089 small optic lobes SRI 0.049 sorcin isoform b SRI 0.049 sorcin isoform a CAPN7 0.049 calpain 7 GCA 0.048 grancalcin, EF-hand calcium binding protein PEF1 0.035 penta-EF-hand domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.