SOLH 31533

Name: SOLH	Sequence: fasta or formatted (1086aa)		NCBI GI: 5032105
Description: small optic lobes		Referenced in: Cysteine Proteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.0 109 2 C cysteine 4.2 46 2 D aspartate 3.7 40 2 E glutamate 7.2 78 4 F phenylalanine 3.1 34 1 G glycine 8.3 90 3 H histidine 2.9 32 1 I isoleucine 1.8 20 2 K lysine 2.6 28 2 L leucine 9.3 101 2 M methionine 1.1 12 1 N asparagine 2.1 23 2 P proline 9.3 101 3 Q glutamine 3.8 41 2 R arginine 7.2 78 3 S serine 8.2 89 2 T threonine 4.6 50 2 V valine 7.3 79 3 W tryptophan 2.1 23 1 Y tyrosine 1.1 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small optic lobes CAPN11 0.064 calpain 11 CAPN12 0.063 calpain 12 CAPN3 0.063 calpain 3 isoform c CAPN3 0.059 calpain 3 isoform a CAPN3 0.059 calpain 3 isoform b CAPN14 0.059 calpain 14 CAPN1 0.059 calpain 1, large subunit CAPN8 0.058 calpain 8 CAPN2 0.056 calpain 2 isoform 1 CAPN5 0.054 calpain 5 CAPN9 0.054 calpain 9 isoform 1 CAPN3 0.053 calpain 3 isoform f CAPN2 0.050 calpain 2 isoform 2 CAPN9 0.045 calpain 9 isoform 2 CAPN10 0.044 calpain 10 isoform c CAPN10 0.044 calpain 10 isoform a CAPN13 0.042 calpain 13 CAPN7 0.038 calpain 7 CAPN6 0.032 calpain 6 RNF31 0.014 ring finger protein 31 RANBP2 0.013 RAN binding protein 2 PRR12 0.013 proline rich 12 ENAH 0.013 enabled homolog isoform a ENAH 0.013 enabled homolog isoform b WASF2 0.013 WAS protein family, member 2 WIPF3 0.012 WAS/WASL interacting protein family, member 3 [Homo... NACA 0.011 nascent polypeptide-associated complex alpha subuni... SETD1B 0.011 SET domain containing 1B CPSF6 0.011 cleavage and polyadenylation specific factor 6, 68 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.