PEF1 34958

Name: PEF1	Sequence: fasta or formatted (284aa)		NCBI GI: 6912582
Description: penta-EF-hand domain containing 1		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Calmodulin and Calcium
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 20 2 C cysteine 1.8 5 1 D aspartate 3.9 11 1 E glutamate 2.5 7 1 F phenylalanine 4.2 12 1 G glycine 14.8 42 3 H histidine 0.7 2 1 I isoleucine 2.5 7 1 K lysine 2.5 7 1 L leucine 6.0 17 2 M methionine 3.5 10 2 N asparagine 3.9 11 1 P proline 11.6 33 3 Q glutamine 8.1 23 2 R arginine 3.5 10 1 S serine 8.8 25 2 T threonine 3.5 10 1 V valine 3.2 9 1 W tryptophan 1.4 4 1 Y tyrosine 6.7 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 penta-EF-hand domain containing 1 PDCD6 0.188 programmed cell death 6 SRI 0.164 sorcin isoform a SRI 0.154 sorcin isoform b GCA 0.149 grancalcin, EF-hand calcium binding protein CAPNS1 0.108 calpain, small subunit 1 CAPNS1 0.108 calpain, small subunit 1 CAPNS2 0.097 calpain small subunit 2 CAPN1 0.089 calpain 1, large subunit CAPN11 0.089 calpain 11 CAPN3 0.087 calpain 3 isoform f CAPN3 0.087 calpain 3 isoform a CAPN3 0.087 calpain 3 isoform b CAPN3 0.087 calpain 3 isoform e CAPN3 0.087 calpain 3 isoform e CAPN3 0.087 calpain 3 isoform d CAPN3 0.087 calpain 3 isoform c CAPN2 0.085 calpain 2 isoform 1 CAPN2 0.085 calpain 2 isoform 2 CAPN9 0.084 calpain 9 isoform 2 CAPN9 0.084 calpain 9 isoform 1 COL1A1 0.082 alpha 1 type I collagen preproprotein ANXA7 0.079 annexin VII isoform 2 ANXA7 0.079 annexin VII isoform 1 COL3A1 0.075 collagen type III alpha 1 preproprotein CAPN8 0.068 calpain 8 WBP11 0.067 WW domain binding protein 11 COL10A1 0.065 type X collagen alpha 1 precursor COL8A2 0.063 collagen, type VIII, alpha 2 COL5A1 0.063 alpha 1 type V collagen preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.