CAPN10 37116

Name: CAPN10	Sequence: fasta or formatted (517aa)		NCBI GI: 89353291
Description: calpain 10 isoform c		Referenced in: Cysteine Proteases
Other entries for this name: alt prot [138aa] calpain 10 isoform h alt prot [672aa] calpain 10 isoform a alt prot [139aa] calpain 10 isoform g
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 45 2 C cysteine 3.7 19 2 D aspartate 4.6 24 2 E glutamate 6.8 35 4 F phenylalanine 3.7 19 1 G glycine 8.5 44 2 H histidine 2.7 14 1 I isoleucine 2.5 13 1 K lysine 2.3 12 1 L leucine 11.8 61 3 M methionine 0.8 4 1 N asparagine 1.0 5 2 P proline 6.0 31 2 Q glutamine 6.4 33 2 R arginine 8.3 43 2 S serine 6.4 33 2 T threonine 4.1 21 2 V valine 6.2 32 2 W tryptophan 3.7 19 1 Y tyrosine 1.9 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 10 isoform c CAPN10 0.860 calpain 10 isoform a CAPN12 0.194 calpain 12 CAPN11 0.194 calpain 11 CAPN8 0.182 calpain 8 CAPN1 0.182 calpain 1, large subunit CAPN3 0.177 calpain 3 isoform c CAPN2 0.175 calpain 2 isoform 1 CAPN3 0.174 calpain 3 isoform a CAPN3 0.174 calpain 3 isoform b CAPN5 0.163 calpain 5 CAPN10 0.163 calpain 10 isoform g CAPN9 0.160 calpain 9 isoform 1 CAPN3 0.158 calpain 3 isoform f CAPN2 0.154 calpain 2 isoform 2 CAPN10 0.150 calpain 10 isoform h CAPN14 0.144 calpain 14 CAPN9 0.134 calpain 9 isoform 2 CAPN6 0.123 calpain 6 CAPN13 0.116 calpain 13 SOLH 0.092 small optic lobes CAPN7 0.044 calpain 7 CAPN3 0.008 calpain 3 isoform d CNTNAP2 0.008 cell recognition molecule Caspr2 precursor BRUNOL4 0.006 bruno-like 4, RNA binding protein isoform 4 BRUNOL4 0.006 bruno-like 4, RNA binding protein isoform 3 BRUNOL4 0.006 bruno-like 4, RNA binding protein isoform 2 BRUNOL4 0.006 bruno-like 4, RNA binding protein isoform 1 HTT 0.005 huntingtin LOC100293676 0.005 PREDICTED: similar to Fc fragment of IgG binding pr... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.