GCA 34909

Name: GCA	Sequence: fasta or formatted (217aa)		NCBI GI: 6912388
Description: grancalcin, EF-hand calcium binding protein		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Calmodulin and Calcium Cytoskeleton Neutrophils, Eosinophils, and Basophils
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 17 2 C cysteine 1.8 4 2 D aspartate 6.9 15 2 E glutamate 4.1 9 2 F phenylalanine 6.0 13 2 G glycine 11.1 24 3 H histidine 1.8 4 2 I isoleucine 4.6 10 1 K lysine 3.2 7 1 L leucine 7.4 16 2 M methionine 4.1 9 1 N asparagine 3.2 7 1 P proline 3.7 8 1 Q glutamine 5.5 12 2 R arginine 4.6 10 1 S serine 6.5 14 2 T threonine 6.5 14 2 V valine 4.6 10 1 W tryptophan 0.9 2 1 Y tyrosine 5.5 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 grancalcin, EF-hand calcium binding protein SRI 0.520 sorcin isoform a SRI 0.501 sorcin isoform b PEF1 0.205 penta-EF-hand domain containing 1 PDCD6 0.195 programmed cell death 6 CAPN11 0.176 calpain 11 CAPNS1 0.172 calpain, small subunit 1 CAPNS1 0.172 calpain, small subunit 1 CAPN3 0.169 calpain 3 isoform f CAPN3 0.169 calpain 3 isoform a CAPN3 0.169 calpain 3 isoform b CAPN3 0.169 calpain 3 isoform d CAPN3 0.169 calpain 3 isoform c CAPNS2 0.165 calpain small subunit 2 CAPN2 0.158 calpain 2 isoform 1 CAPN2 0.158 calpain 2 isoform 2 CAPN8 0.158 calpain 8 CAPN9 0.151 calpain 9 isoform 2 CAPN9 0.151 calpain 9 isoform 1 CAPN1 0.151 calpain 1, large subunit CAPN3 0.144 calpain 3 isoform e CAPN3 0.144 calpain 3 isoform e CAPN12 0.096 calpain 12 CAPN13 0.073 calpain 13 CAPN14 0.071 calpain 14 CALML5 0.054 calmodulin-like 5 CALML3 0.035 calmodulin-like 3 CETN1 0.033 centrin 1 CABP1 0.031 calcium binding protein 1 isoform 3 CABP1 0.031 calcium binding protein 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.