CAPNS2 3802

Name: CAPNS2	Sequence: fasta or formatted (248aa)		NCBI GI: 14161692
Description: calpain small subunit 2		Referenced in: Cysteine Proteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 17 4 C cysteine 1.2 3 1 D aspartate 6.9 17 1 E glutamate 6.0 15 2 F phenylalanine 5.6 14 1 G glycine 10.9 27 4 H histidine 1.2 3 1 I isoleucine 4.4 11 1 K lysine 4.8 12 2 L leucine 10.1 25 2 M methionine 3.2 8 1 N asparagine 4.0 10 2 P proline 2.0 5 3 Q glutamine 6.5 16 2 R arginine 6.5 16 2 S serine 6.9 17 2 T threonine 4.0 10 2 V valine 4.8 12 1 W tryptophan 1.2 3 1 Y tyrosine 2.8 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain small subunit 2 CAPNS1 0.658 calpain, small subunit 1 CAPNS1 0.658 calpain, small subunit 1 CAPN3 0.389 calpain 3 isoform f CAPN3 0.389 calpain 3 isoform a CAPN3 0.389 calpain 3 isoform b CAPN3 0.389 calpain 3 isoform d CAPN3 0.387 calpain 3 isoform c CAPN1 0.357 calpain 1, large subunit CAPN3 0.342 calpain 3 isoform e CAPN3 0.342 calpain 3 isoform e CAPN2 0.305 calpain 2 isoform 1 CAPN2 0.305 calpain 2 isoform 2 CAPN9 0.296 calpain 9 isoform 2 CAPN9 0.296 calpain 9 isoform 1 CAPN11 0.286 calpain 11 CAPN8 0.282 calpain 8 SRI 0.155 sorcin isoform b SRI 0.155 sorcin isoform a CAPN14 0.147 calpain 14 GCA 0.147 grancalcin, EF-hand calcium binding protein PDCD6 0.141 programmed cell death 6 CAPN12 0.139 calpain 12 CAPN13 0.130 calpain 13 PEF1 0.120 penta-EF-hand domain containing 1 SLC25A24 0.057 solute carrier family 25 member 24 isoform 2 SLC25A24 0.048 solute carrier family 25 member 24 isoform 1 CALML5 0.042 calmodulin-like 5 SLC25A25 0.042 solute carrier family 25, member 25 isoform c LOC100292202 0.042 PREDICTED: similar to solute carrier family 25, mem... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.