CAPN10 3054

Name: CAPN10	Sequence: fasta or formatted (672aa)		NCBI GI: 13186302
Description: calpain 10 isoform a		Referenced in: Cysteine Proteases
Other entries for this name: alt prot [138aa] calpain 10 isoform h alt prot [139aa] calpain 10 isoform g alt prot [517aa] calpain 10 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 58 2 C cysteine 3.6 24 2 D aspartate 4.0 27 2 E glutamate 6.2 42 4 F phenylalanine 4.2 28 1 G glycine 8.6 58 2 H histidine 3.0 20 1 I isoleucine 2.5 17 1 K lysine 2.2 15 1 L leucine 10.9 73 3 M methionine 0.7 5 1 N asparagine 1.3 9 2 P proline 7.0 47 2 Q glutamine 5.5 37 2 R arginine 8.5 57 2 S serine 6.5 44 2 T threonine 4.6 31 2 V valine 6.7 45 2 W tryptophan 3.1 21 1 Y tyrosine 2.1 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 10 isoform a CAPN10 0.658 calpain 10 isoform c CAPN11 0.152 calpain 11 CAPN12 0.152 calpain 12 CAPN8 0.148 calpain 8 CAPN1 0.143 calpain 1, large subunit CAPN2 0.141 calpain 2 isoform 1 CAPN3 0.141 calpain 3 isoform c CAPN5 0.139 calpain 5 CAPN3 0.137 calpain 3 isoform a CAPN3 0.137 calpain 3 isoform b CAPN9 0.128 calpain 9 isoform 1 CAPN3 0.126 calpain 3 isoform f CAPN10 0.125 calpain 10 isoform g CAPN2 0.125 calpain 2 isoform 2 CAPN10 0.116 calpain 10 isoform h CAPN14 0.115 calpain 14 CAPN6 0.112 calpain 6 CAPN9 0.108 calpain 9 isoform 2 CAPN13 0.094 calpain 13 SOLH 0.071 small optic lobes CAPN7 0.050 calpain 7 CAPN3 0.010 calpain 3 isoform d HPX-2 0.005 PREDICTED: similar to double homeobox, 4 HTT 0.004 huntingtin LOC100289581 0.004 PREDICTED: hypothetical protein XP_002343082 CNTNAP2 0.004 cell recognition molecule Caspr2 precursor LOC100293676 0.004 PREDICTED: similar to Fc fragment of IgG binding pr... LOC100134359 0.004 PREDICTED: hypothetical protein LOC100293268 0.004 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.