CAPN5 26607

Name: CAPN5	Sequence: fasta or formatted (640aa)		NCBI GI: 37577157
Description: calpain 5		Referenced in: Cysteine Proteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 38 2 C cysteine 2.7 17 1 D aspartate 6.2 40 2 E glutamate 6.6 42 2 F phenylalanine 4.4 28 2 G glycine 6.7 43 3 H histidine 3.6 23 1 I isoleucine 4.5 29 2 K lysine 5.9 38 2 L leucine 8.0 51 2 M methionine 1.2 8 1 N asparagine 4.1 26 2 P proline 4.8 31 2 Q glutamine 4.1 26 2 R arginine 7.0 45 3 S serine 6.4 41 2 T threonine 5.0 32 2 V valine 7.2 46 2 W tryptophan 2.7 17 1 Y tyrosine 3.0 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 5 CAPN6 0.436 calpain 6 CAPN3 0.272 calpain 3 isoform c CAPN3 0.255 calpain 3 isoform a CAPN3 0.255 calpain 3 isoform b CAPN9 0.253 calpain 9 isoform 1 CAPN8 0.246 calpain 8 CAPN2 0.242 calpain 2 isoform 1 CAPN1 0.237 calpain 1, large subunit CAPN11 0.234 calpain 11 CAPN3 0.232 calpain 3 isoform f CAPN9 0.221 calpain 9 isoform 2 CAPN2 0.215 calpain 2 isoform 2 CAPN12 0.186 calpain 12 CAPN14 0.183 calpain 14 CAPN10 0.147 calpain 10 isoform a CAPN13 0.134 calpain 13 CAPN10 0.131 calpain 10 isoform c SOLH 0.092 small optic lobes CAPN7 0.070 calpain 7 CAPN10 0.028 calpain 10 isoform g CAPN3 0.020 calpain 3 isoform d ESYT1 0.007 extended synaptotagmin-like protein 1 UNC13A 0.006 unc-13 homolog A ANKRD56 0.004 ankyrin repeat domain 56 CHRNA4 0.004 cholinergic receptor, nicotinic, alpha 4 subunit prec... FLJ43860 0.004 hypothetical protein LOC389690 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.