SRI 29504

Name: SRI	Sequence: fasta or formatted (198aa)		NCBI GI: 4507207
Description: sorcin isoform a		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Calmodulin and Calcium Muscle
Other entries for this name: alt prot [183aa] sorcin isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 16 2 C cysteine 2.5 5 2 D aspartate 7.6 15 2 E glutamate 2.5 5 1 F phenylalanine 6.1 12 1 G glycine 12.6 25 3 H histidine 1.0 2 1 I isoleucine 3.5 7 1 K lysine 3.0 6 1 L leucine 6.6 13 1 M methionine 3.5 7 1 N asparagine 3.0 6 1 P proline 5.6 11 1 Q glutamine 6.6 13 2 R arginine 5.6 11 3 S serine 5.1 10 1 T threonine 6.1 12 2 V valine 5.1 10 2 W tryptophan 1.0 2 1 Y tyrosine 5.1 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorcin isoform a SRI 0.898 sorcin isoform b GCA 0.564 grancalcin, EF-hand calcium binding protein PEF1 0.245 penta-EF-hand domain containing 1 PDCD6 0.240 programmed cell death 6 CAPNS1 0.207 calpain, small subunit 1 CAPNS1 0.207 calpain, small subunit 1 CAPN3 0.196 calpain 3 isoform f CAPN3 0.196 calpain 3 isoform a CAPN3 0.196 calpain 3 isoform b CAPN3 0.196 calpain 3 isoform d CAPN3 0.196 calpain 3 isoform c CAPNS2 0.189 calpain small subunit 2 CAPN8 0.189 calpain 8 CAPN1 0.179 calpain 1, large subunit CAPN9 0.176 calpain 9 isoform 2 CAPN9 0.176 calpain 9 isoform 1 CAPN2 0.176 calpain 2 isoform 1 CAPN2 0.176 calpain 2 isoform 2 CAPN3 0.171 calpain 3 isoform e CAPN3 0.171 calpain 3 isoform e CAPN11 0.168 calpain 11 CAPN12 0.097 calpain 12 CAPN13 0.074 calpain 13 CAPN14 0.069 calpain 14 CALML3 0.051 calmodulin-like 3 SLC25A25 0.051 solute carrier family 25, member 25 isoform c LOC100292202 0.048 PREDICTED: similar to solute carrier family 25, mem... LOC100292202 0.048 PREDICTED: similar to solute carrier family 25, mem... SLC25A25 0.048 solute carrier family 25, member 25 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.