CAPN11 13397

Name: CAPN11	Sequence: fasta or formatted (739aa)		NCBI GI: 215490104
Description: calpain 11		Referenced in: Cysteine Proteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 35 2 C cysteine 2.0 15 1 D aspartate 6.5 48 3 E glutamate 7.2 53 2 F phenylalanine 5.8 43 2 G glycine 7.3 54 2 H histidine 2.3 17 1 I isoleucine 4.7 35 3 K lysine 6.1 45 2 L leucine 10.3 76 2 M methionine 3.0 22 1 N asparagine 4.3 32 2 P proline 3.9 29 2 Q glutamine 5.0 37 2 R arginine 4.7 35 2 S serine 7.4 55 2 T threonine 4.7 35 2 V valine 4.9 36 3 W tryptophan 2.6 19 1 Y tyrosine 2.4 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 11 CAPN1 0.531 calpain 1, large subunit CAPN2 0.506 calpain 2 isoform 1 CAPN8 0.475 calpain 8 CAPN2 0.455 calpain 2 isoform 2 CAPN3 0.451 calpain 3 isoform c CAPN3 0.432 calpain 3 isoform b CAPN3 0.430 calpain 3 isoform a CAPN9 0.425 calpain 9 isoform 1 CAPN3 0.414 calpain 3 isoform f CAPN9 0.401 calpain 9 isoform 2 CAPN12 0.335 calpain 12 CAPN14 0.290 calpain 14 CAPN13 0.210 calpain 13 CAPN5 0.205 calpain 5 CAPN6 0.162 calpain 6 CAPN10 0.140 calpain 10 isoform a CAPN10 0.137 calpain 10 isoform c CAPN3 0.133 calpain 3 isoform d SOLH 0.095 small optic lobes CAPNS2 0.091 calpain small subunit 2 CAPN3 0.089 calpain 3 isoform e CAPN3 0.089 calpain 3 isoform e CAPNS1 0.087 calpain, small subunit 1 CAPNS1 0.087 calpain, small subunit 1 GCA 0.050 grancalcin, EF-hand calcium binding protein CAPN7 0.045 calpain 7 SRI 0.044 sorcin isoform b SRI 0.044 sorcin isoform a PEF1 0.035 penta-EF-hand domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.