CAPN9 33327

Name: CAPN9	Sequence: fasta or formatted (690aa)		NCBI GI: 5729758
Description: calpain 9 isoform 1		Referenced in: Stomach, Small Intestine, and Colon Cysteine Proteases
Other entries for this name: alt prot [664aa] calpain 9 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 51 2 C cysteine 1.7 12 1 D aspartate 6.5 45 2 E glutamate 8.6 59 3 F phenylalanine 7.0 48 2 G glycine 5.8 40 2 H histidine 2.5 17 1 I isoleucine 5.5 38 2 K lysine 6.2 43 3 L leucine 9.9 68 2 M methionine 1.4 10 1 N asparagine 3.6 25 1 P proline 4.5 31 2 Q glutamine 4.5 31 1 R arginine 5.7 39 2 S serine 6.2 43 2 T threonine 4.6 32 1 V valine 4.1 28 2 W tryptophan 2.2 15 1 Y tyrosine 2.2 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 9 isoform 1 CAPN9 0.947 calpain 9 isoform 2 CAPN3 0.568 calpain 3 isoform c CAPN3 0.544 calpain 3 isoform b CAPN3 0.541 calpain 3 isoform a CAPN1 0.523 calpain 1, large subunit CAPN3 0.508 calpain 3 isoform f CAPN2 0.505 calpain 2 isoform 1 CAPN8 0.502 calpain 8 CAPN2 0.478 calpain 2 isoform 2 CAPN11 0.460 calpain 11 CAPN12 0.333 calpain 12 CAPN14 0.319 calpain 14 CAPN5 0.240 calpain 5 CAPN13 0.204 calpain 13 CAPN6 0.195 calpain 6 CAPN3 0.176 calpain 3 isoform d CAPN10 0.127 calpain 10 isoform a CAPN10 0.122 calpain 10 isoform c CAPNS2 0.102 calpain small subunit 2 CAPNS1 0.101 calpain, small subunit 1 CAPNS1 0.101 calpain, small subunit 1 CAPN3 0.090 calpain 3 isoform e CAPN3 0.090 calpain 3 isoform e SOLH 0.086 small optic lobes SRI 0.050 sorcin isoform b SRI 0.050 sorcin isoform a CAPN7 0.048 calpain 7 GCA 0.046 grancalcin, EF-hand calcium binding protein PEF1 0.035 penta-EF-hand domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.