CAPN2 15208

Name: CAPN2	Sequence: fasta or formatted (622aa)		NCBI GI: 225703100
Description: calpain 2 isoform 2		Referenced in: Cysteine Proteases
Other entries for this name: alt prot [700aa] calpain 2 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 35 2 C cysteine 2.3 14 1 D aspartate 7.2 45 2 E glutamate 9.6 60 3 F phenylalanine 5.9 37 2 G glycine 7.1 44 2 H histidine 1.4 9 1 I isoleucine 7.1 44 2 K lysine 5.6 35 2 L leucine 9.5 59 2 M methionine 1.8 11 1 N asparagine 4.0 25 1 P proline 3.1 19 3 Q glutamine 3.9 24 1 R arginine 5.8 36 3 S serine 5.6 35 1 T threonine 5.3 33 2 V valine 4.0 25 3 W tryptophan 2.4 15 1 Y tyrosine 2.7 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 2 isoform 2 CAPN2 0.998 calpain 2 isoform 1 CAPN1 0.661 calpain 1, large subunit CAPN8 0.634 calpain 8 CAPN3 0.547 calpain 3 isoform c CAPN11 0.545 calpain 11 CAPN9 0.530 calpain 9 isoform 1 CAPN3 0.519 calpain 3 isoform f CAPN3 0.519 calpain 3 isoform b CAPN3 0.517 calpain 3 isoform a CAPN9 0.500 calpain 9 isoform 2 CAPN12 0.369 calpain 12 CAPN14 0.320 calpain 14 CAPN5 0.226 calpain 5 CAPN13 0.200 calpain 13 CAPN6 0.191 calpain 6 CAPN3 0.167 calpain 3 isoform d CAPN10 0.138 calpain 10 isoform a CAPN10 0.130 calpain 10 isoform c CAPNS1 0.124 calpain, small subunit 1 CAPNS1 0.124 calpain, small subunit 1 CAPNS2 0.116 calpain small subunit 2 CAPN3 0.107 calpain 3 isoform e CAPN3 0.107 calpain 3 isoform e SOLH 0.090 small optic lobes SRI 0.055 sorcin isoform b SRI 0.055 sorcin isoform a GCA 0.053 grancalcin, EF-hand calcium binding protein CAPN7 0.049 calpain 7 PEF1 0.040 penta-EF-hand domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.