CAPN13 27655

Name: CAPN13	Sequence: fasta or formatted (669aa)		NCBI GI: 41152101
Description: calpain 13		Referenced in: Cysteine Proteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 36 2 C cysteine 1.8 12 1 D aspartate 5.5 37 2 E glutamate 5.5 37 2 F phenylalanine 6.3 42 2 G glycine 6.4 43 2 H histidine 2.7 18 1 I isoleucine 4.3 29 2 K lysine 4.8 32 2 L leucine 10.2 68 2 M methionine 2.7 18 1 N asparagine 3.6 24 2 P proline 4.3 29 2 Q glutamine 6.6 44 2 R arginine 6.1 41 2 S serine 7.8 52 2 T threonine 5.1 34 2 V valine 6.0 40 3 W tryptophan 2.5 17 1 Y tyrosine 2.4 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 13 CAPN14 0.252 calpain 14 CAPN1 0.237 calpain 1, large subunit CAPN11 0.233 calpain 11 CAPN8 0.227 calpain 8 CAPN3 0.226 calpain 3 isoform c CAPN2 0.212 calpain 2 isoform 1 CAPN9 0.210 calpain 9 isoform 1 CAPN3 0.206 calpain 3 isoform b CAPN3 0.204 calpain 3 isoform a CAPN3 0.192 calpain 3 isoform f CAPN9 0.186 calpain 9 isoform 2 CAPN2 0.185 calpain 2 isoform 2 CAPN12 0.180 calpain 12 CAPN5 0.130 calpain 5 CAPN6 0.113 calpain 6 CAPN10 0.096 calpain 10 isoform a CAPN10 0.091 calpain 10 isoform c SOLH 0.070 small optic lobes CAPNS1 0.057 calpain, small subunit 1 CAPNS1 0.057 calpain, small subunit 1 CAPN7 0.055 calpain 7 CAPN3 0.053 calpain 3 isoform d CAPN3 0.049 calpain 3 isoform e CAPN3 0.049 calpain 3 isoform e CAPNS2 0.046 calpain small subunit 2 GCA 0.023 grancalcin, EF-hand calcium binding protein SRI 0.021 sorcin isoform b SRI 0.021 sorcin isoform a CAPN10 0.017 calpain 10 isoform g Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.