Guide to the Human Genome
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Name: FAS Sequence: fasta or formatted (335aa) NCBI GI: 4507583
Description:

tumor necrosis factor receptor superfamily, member 6 isoform 1 precursor

Referenced in:

TNF and Related Signals

Other entries for this name:
alt prot [314aa] tumor necrosis factor receptor superfamily, member 6 isoform 2 pr...
alt prot [220aa] tumor necrosis factor receptor superfamily, member 6 isoform 3 pr...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         11           1
 C cysteine            6.3         21           1
 D aspartate           5.1         17           1
 E glutamate           7.8         26           2
 F phenylalanine       1.8          6           2
 G glycine             5.1         17           1
 H histidine           3.3         11           2
 I isoleucine          5.4         18           2
 K lysine              9.6         32           2
 L leucine             9.9         33           4
 M methionine          0.6          2           1
 N asparagine          6.6         22           1
 P proline             3.6         12           2
 Q glutamine           4.2         14           1
 R arginine            4.8         16           2
 S serine              6.0         20           2
 T threonine           8.4         28           2
 V valine              6.6         22           1
 W tryptophan          1.2          4           1
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor necrosis factor receptor superfamily, member 6 ... 
FAS                   0.915   tumor necrosis factor receptor superfamily, member 6...
FAS                   0.663   tumor necrosis factor receptor superfamily, member 6...
TNFRSF10A             0.070   tumor necrosis factor receptor superfamily, member 1...
TNFRSF10B             0.065   tumor necrosis factor receptor superfamily, member ...
TNFRSF14              0.064   tumor necrosis factor receptor superfamily, member 1...
LTBR                  0.064   lymphotoxin beta receptor 
TNFRSF10B             0.062   tumor necrosis factor receptor superfamily, member ...
TNFRSF25              0.059   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.059   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.059   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.059   tumor necrosis factor receptor superfamily, member 25...
CD27                  0.059   tumor necrosis factor receptor superfamily, member 7 ...
TNFRSF10D             0.058   tumor necrosis factor receptor superfamily, member 1...
TNFRSF10C             0.056   tumor necrosis factor receptor superfamily, member 1...
CD40                  0.056   CD40 antigen isoform 1 precursor 
CD40                  0.056   CD40 antigen isoform 2 precursor 
TNFRSF11B             0.050   osteoprotegerin precursor 
TNFRSF1B              0.045   tumor necrosis factor receptor 2 precursor 
NGFR                  0.045   nerve growth factor receptor precursor 
TNFRSF11A             0.043   tumor necrosis factor receptor superfamily, member 11...
TNFRSF6B              0.042   tumor necrosis factor receptor superfamily, member 6...
TNFRSF6B              0.042   tumor necrosis factor receptor superfamily, member 6b...
TNFRSF1A              0.036   tumor necrosis factor receptor 1 precursor 
TNFRSF4               0.033   tumor necrosis factor receptor superfamily, member 4 ...
TNFRSF8               0.022   tumor necrosis factor receptor superfamily, member 8...
TNFRSF25              0.018   tumor necrosis factor receptor superfamily, member 2...
STAB2                 0.018   stabilin 2 precursor 
LAMA4                 0.015   laminin, alpha 4 isoform 1 precursor 
TNFRSF9               0.015   tumor necrosis factor receptor superfamily, member 9 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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