Guide to the Human Genome
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Name: FAS Sequence: fasta or formatted (314aa) NCBI GI: 23510421
Description:

tumor necrosis factor receptor superfamily, member 6 isoform 2 precursor

Referenced in:

TNF and Related Signals

Other entries for this name:
alt prot [220aa] tumor necrosis factor receptor superfamily, member 6 isoform 3 pr...
alt prot [335aa] tumor necrosis factor receptor superfamily, member 6 isoform 1 pr...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         11           1
 C cysteine            6.4         20           1
 D aspartate           5.4         17           1
 E glutamate           8.3         26           2
 F phenylalanine       1.9          6           2
 G glycine             4.8         15           1
 H histidine           3.5         11           2
 I isoleucine          5.1         16           2
 K lysine             10.2         32           2
 L leucine             8.3         26           2
 M methionine          0.6          2           1
 N asparagine          6.7         21           1
 P proline             3.2         10           2
 Q glutamine           4.5         14           1
 R arginine            4.8         15           2
 S serine              5.7         18           2
 T threonine           8.9         28           2
 V valine              6.7         21           1
 W tryptophan          0.6          2           1
 Y tyrosine            1.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor necrosis factor receptor superfamily, member 6... 
FAS                   0.981   tumor necrosis factor receptor superfamily, member 6 ...
FAS                   0.620   tumor necrosis factor receptor superfamily, member 6...
TNFRSF10B             0.072   tumor necrosis factor receptor superfamily, member ...
LTBR                  0.070   lymphotoxin beta receptor 
TNFRSF10B             0.065   tumor necrosis factor receptor superfamily, member ...
TNFRSF14              0.064   tumor necrosis factor receptor superfamily, member 1...
TNFRSF25              0.064   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.064   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.064   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.064   tumor necrosis factor receptor superfamily, member 25...
CD27                  0.064   tumor necrosis factor receptor superfamily, member 7 ...
TNFRSF10C             0.060   tumor necrosis factor receptor superfamily, member 1...
CD40                  0.060   CD40 antigen isoform 1 precursor 
CD40                  0.060   CD40 antigen isoform 2 precursor 
TNFRSF10A             0.060   tumor necrosis factor receptor superfamily, member 1...
TNFRSF10D             0.059   tumor necrosis factor receptor superfamily, member 1...
TNFRSF1B              0.048   tumor necrosis factor receptor 2 precursor 
NGFR                  0.048   nerve growth factor receptor precursor 
TNFRSF11A             0.046   tumor necrosis factor receptor superfamily, member 11...
TNFRSF6B              0.045   tumor necrosis factor receptor superfamily, member 6...
TNFRSF6B              0.045   tumor necrosis factor receptor superfamily, member 6b...
TNFRSF1A              0.037   tumor necrosis factor receptor 1 precursor 
TNFRSF4               0.035   tumor necrosis factor receptor superfamily, member 4 ...
TNFRSF8               0.024   tumor necrosis factor receptor superfamily, member 8...
ZNF521                0.019   zinc finger protein 521 
NIN                   0.019   ninein isoform 4 
NIN                   0.019   ninein isoform 5 
NIN                   0.019   ninein isoform 1 
NIN                   0.019   ninein isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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