CD40 29590

Name: CD40	Sequence: fasta or formatted (277aa)		NCBI GI: 4507581
Description: CD40 antigen isoform 1 precursor		Referenced in: TNF and Related Signals
Other entries for this name: alt prot [203aa] CD40 antigen isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 12 2 C cysteine 8.3 23 2 D aspartate 4.0 11 2 E glutamate 7.9 22 2 F phenylalanine 3.6 10 2 G glycine 5.8 16 1 H histidine 3.2 9 1 I isoleucine 4.3 12 2 K lysine 5.4 15 2 L leucine 7.9 22 2 M methionine 0.4 1 1 N asparagine 2.9 8 1 P proline 7.6 21 2 Q glutamine 6.9 19 2 R arginine 3.2 9 1 S serine 6.1 17 2 T threonine 7.9 22 1 V valine 7.9 22 2 W tryptophan 1.4 4 1 Y tyrosine 0.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD40 antigen isoform 1 precursor CD40 0.609 CD40 antigen isoform 2 precursor TNFRSF11A 0.219 tumor necrosis factor receptor superfamily, member 11... LTBR 0.163 lymphotoxin beta receptor TNFRSF1B 0.156 tumor necrosis factor receptor 2 precursor TNFRSF11B 0.137 osteoprotegerin precursor TNFRSF14 0.133 tumor necrosis factor receptor superfamily, member 1... TNFRSF6B 0.102 tumor necrosis factor receptor superfamily, member 6... TNFRSF6B 0.102 tumor necrosis factor receptor superfamily, member 6b... TNFRSF4 0.091 tumor necrosis factor receptor superfamily, member 4 ... TNFRSF21 0.089 tumor necrosis factor receptor superfamily, member 21... NGFR 0.079 nerve growth factor receptor precursor CD27 0.077 tumor necrosis factor receptor superfamily, member 7 ... FAS 0.067 tumor necrosis factor receptor superfamily, member 6... FAS 0.067 tumor necrosis factor receptor superfamily, member 6... FAS 0.067 tumor necrosis factor receptor superfamily, member 6 ... TNFRSF9 0.063 tumor necrosis factor receptor superfamily, member 9 ... TNFRSF1A 0.051 tumor necrosis factor receptor 1 precursor TNFRSF25 0.044 tumor necrosis factor receptor superfamily, member 25... TNFRSF25 0.040 tumor necrosis factor receptor superfamily, member 2... TNFRSF25 0.040 tumor necrosis factor receptor superfamily, member 2... TNFRSF25 0.040 tumor necrosis factor receptor superfamily, member 2... TNFRSF18 0.037 tumor necrosis factor receptor superfamily, member 18... TNFRSF18 0.037 tumor necrosis factor receptor superfamily, member 1... TNFRSF8 0.037 tumor necrosis factor receptor superfamily, member 8... TNFRSF18 0.030 tumor necrosis factor receptor superfamily, member 1... KIAA1324 0.030 hypothetical protein LOC57535 LAMC3 0.030 laminin, gamma 3 precursor TNFRSF10B 0.028 tumor necrosis factor receptor superfamily, member ... TNFRSF19 0.028 tumor necrosis factor receptor superfamily, member 1... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.