Guide to the Human Genome
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Name: TNFRSF8 Sequence: fasta or formatted (595aa) NCBI GI: 68348711
Description:

tumor necrosis factor receptor superfamily, member 8 isoform 1 precursor

Referenced in:

TNF and Related Signals

Other entries for this name:
alt prot [132aa] tumor necrosis factor receptor superfamily, member 8 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         53           2
 C cysteine            6.4         38           2
 D aspartate           4.7         28           2
 E glutamate           7.2         43           3
 F phenylalanine       1.8         11           2
 G glycine             5.7         34           2
 H histidine           1.5          9           1
 I isoleucine          1.8         11           1
 K lysine              3.9         23           1
 L leucine             7.4         44           2
 M methionine          1.8         11           1
 N asparagine          1.8         11           2
 P proline            11.3         67           2
 Q glutamine           3.5         21           2
 R arginine            6.2         37           2
 S serine              9.7         58           2
 T threonine           7.2         43           2
 V valine              6.4         38           4
 W tryptophan          0.5          3           1
 Y tyrosine            2.0         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor necrosis factor receptor superfamily, member 8... 
TNFRSF8               0.201   tumor necrosis factor receptor superfamily, member 8...
TNFRSF1B              0.053   tumor necrosis factor receptor 2 precursor 
LTBR                  0.044   lymphotoxin beta receptor 
TNFRSF6B              0.036   tumor necrosis factor receptor superfamily, member 6...
TNFRSF6B              0.036   tumor necrosis factor receptor superfamily, member 6b...
TNFRSF21              0.030   tumor necrosis factor receptor superfamily, member 21...
TNFRSF14              0.030   tumor necrosis factor receptor superfamily, member 1...
TNFRSF11B             0.030   osteoprotegerin precursor 
TNFRSF11A             0.025   tumor necrosis factor receptor superfamily, member 11...
TNFRSF10C             0.023   tumor necrosis factor receptor superfamily, member 1...
TNFRSF10A             0.021   tumor necrosis factor receptor superfamily, member 1...
TNFRSF1A              0.020   tumor necrosis factor receptor 1 precursor 
CD40                  0.019   CD40 antigen isoform 2 precursor 
TNFRSF4               0.018   tumor necrosis factor receptor superfamily, member 4 ...
CD40                  0.017   CD40 antigen isoform 1 precursor 
NACAD                 0.016   NAC alpha domain containing 
MUC5AC                0.016   mucin 5AC 
NACAD                 0.016   PREDICTED: NAC alpha domain containing 
MUC5B                 0.016   mucin 5, subtype B, tracheobronchial 
MUC7                  0.016   mucin 7, secreted precursor 
MUC7                  0.016   mucin 7, secreted precursor 
MUC7                  0.016   mucin 7, secreted precursor 
MUC4                  0.016   mucin 4 isoform a 
MUC6                  0.016   mucin 6, gastric 
TNFRSF10B             0.016   tumor necrosis factor receptor superfamily, member ...
NGFR                  0.016   nerve growth factor receptor precursor 
NACAD                 0.016   PREDICTED: NAC alpha domain containing 
NACAD                 0.016   PREDICTED: NAC alpha domain containing 
KRTAP10-6             0.016   keratin associated protein 10-6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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