Guide to the Human Genome
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Name: FAS Sequence: fasta or formatted (220aa) NCBI GI: 23510423
Description:

tumor necrosis factor receptor superfamily, member 6 isoform 3 precursor

Referenced in:

TNF and Related Signals

Other entries for this name:
alt prot [314aa] tumor necrosis factor receptor superfamily, member 6 isoform 2 pr...
alt prot [335aa] tumor necrosis factor receptor superfamily, member 6 isoform 1 pr...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.8          4           1
 C cysteine            9.1         20           1
 D aspartate           3.6          8           1
 E glutamate           8.2         18           2
 F phenylalanine       1.8          4           2
 G glycine             5.9         13           1
 H histidine           4.1          9           2
 I isoleucine          3.2          7           2
 K lysine              8.6         19           1
 L leucine            10.0         22           4
 M methionine          0.9          2           1
 N asparagine          5.5         12           1
 P proline             5.5         12           2
 Q glutamine           3.2          7           1
 R arginine            5.9         13           2
 S serine              5.9         13           2
 T threonine           9.1         20           2
 V valine              5.9         13           1
 W tryptophan          1.4          3           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor necrosis factor receptor superfamily, member 6... 
FAS                   0.987   tumor necrosis factor receptor superfamily, member 6 ...
FAS                   0.861   tumor necrosis factor receptor superfamily, member 6...
TNFRSF10A             0.104   tumor necrosis factor receptor superfamily, member 1...
TNFRSF10B             0.097   tumor necrosis factor receptor superfamily, member ...
LTBR                  0.095   lymphotoxin beta receptor 
TNFRSF10B             0.093   tumor necrosis factor receptor superfamily, member ...
TNFRSF14              0.093   tumor necrosis factor receptor superfamily, member 1...
TNFRSF25              0.088   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.088   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.088   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.088   tumor necrosis factor receptor superfamily, member 25...
CD27                  0.088   tumor necrosis factor receptor superfamily, member 7 ...
TNFRSF10D             0.086   tumor necrosis factor receptor superfamily, member 1...
TNFRSF10C             0.084   tumor necrosis factor receptor superfamily, member 1...
CD40                  0.084   CD40 antigen isoform 1 precursor 
CD40                  0.084   CD40 antigen isoform 2 precursor 
TNFRSF11B             0.071   osteoprotegerin precursor 
TNFRSF1B              0.066   tumor necrosis factor receptor 2 precursor 
NGFR                  0.066   nerve growth factor receptor precursor 
TNFRSF11A             0.064   tumor necrosis factor receptor superfamily, member 11...
TNFRSF6B              0.062   tumor necrosis factor receptor superfamily, member 6...
TNFRSF6B              0.062   tumor necrosis factor receptor superfamily, member 6b...
TNFRSF1A              0.053   tumor necrosis factor receptor 1 precursor 
TNFRSF4               0.049   tumor necrosis factor receptor superfamily, member 4 ...
TNFRSF8               0.033   tumor necrosis factor receptor superfamily, member 8...
TNFRSF25              0.026   tumor necrosis factor receptor superfamily, member 2...
STAB2                 0.026   stabilin 2 precursor 
LAMA4                 0.022   laminin, alpha 4 isoform 1 precursor 
TNFRSF9               0.022   tumor necrosis factor receptor superfamily, member 9 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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