Guide to the Human Genome
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Name: TNFRSF14 Sequence: fasta or formatted (283aa) NCBI GI: 23200041
Description:

tumor necrosis factor receptor superfamily, member 14 precursor

Referenced in:

TNF and Related Signals
Viral Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         19           2
 C cysteine            8.1         23           2
 D aspartate           3.2          9           1
 E glutamate           6.0         17           2
 F phenylalanine       1.8          5           1
 G glycine             8.8         25           2
 H histidine           2.1          6           1
 I isoleucine          3.2          9           2
 K lysine              4.2         12           1
 L leucine             6.4         18           1
 M methionine          1.1          3           1
 N asparagine          2.1          6           1
 P proline             9.2         26           3
 Q glutamine           4.2         12           1
 R arginine            4.9         14           2
 S serine              7.8         22           3
 T threonine           7.4         21           2
 V valine              8.5         24           2
 W tryptophan          2.1          6           2
 Y tyrosine            2.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor necrosis factor receptor superfamily, member 1... 
CD40                  0.129   CD40 antigen isoform 1 precursor 
CD40                  0.126   CD40 antigen isoform 2 precursor 
TNFRSF1B              0.126   tumor necrosis factor receptor 2 precursor 
TNFRSF6B              0.119   tumor necrosis factor receptor superfamily, member 6...
TNFRSF6B              0.119   tumor necrosis factor receptor superfamily, member 6b...
LTBR                  0.109   lymphotoxin beta receptor 
TNFRSF11B             0.094   osteoprotegerin precursor 
TNFRSF11A             0.092   tumor necrosis factor receptor superfamily, member 11...
TNFRSF21              0.089   tumor necrosis factor receptor superfamily, member 21...
TNFRSF25              0.082   tumor necrosis factor receptor superfamily, member 25...
TNFRSF25              0.082   tumor necrosis factor receptor superfamily, member 2...
NGFR                  0.080   nerve growth factor receptor precursor 
TNFRSF4               0.077   tumor necrosis factor receptor superfamily, member 4 ...
FAS                   0.073   tumor necrosis factor receptor superfamily, member 6 ...
TNFRSF25              0.073   tumor necrosis factor receptor superfamily, member 2...
FAS                   0.072   tumor necrosis factor receptor superfamily, member 6...
TNFRSF25              0.072   tumor necrosis factor receptor superfamily, member 2...
FAS                   0.068   tumor necrosis factor receptor superfamily, member 6...
TNFRSF8               0.063   tumor necrosis factor receptor superfamily, member 8...
TNFRSF9               0.058   tumor necrosis factor receptor superfamily, member 9 ...
TNFRSF10D             0.053   tumor necrosis factor receptor superfamily, member 1...
CD27                  0.049   tumor necrosis factor receptor superfamily, member 7 ...
TNFRSF1A              0.048   tumor necrosis factor receptor 1 precursor 
TNFRSF10B             0.043   tumor necrosis factor receptor superfamily, member ...
TNFRSF10B             0.041   tumor necrosis factor receptor superfamily, member ...
EDA2R                 0.039   X-linked ectodysplasin receptor 
LAMC3                 0.032   laminin, gamma 3 precursor 
MEGF6                 0.032   EGF-like-domain, multiple 3 
TNFRSF25              0.029   tumor necrosis factor receptor superfamily, member 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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