CAPN10 3055

Name: CAPN10	Sequence: fasta or formatted (139aa)		NCBI GI: 13186314
Description: calpain 10 isoform g		Referenced in: Cysteine Proteases
Other entries for this name: alt prot [138aa] calpain 10 isoform h alt prot [672aa] calpain 10 isoform a alt prot [517aa] calpain 10 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 14 2 C cysteine 6.5 9 1 D aspartate 7.9 11 2 E glutamate 3.6 5 1 F phenylalanine 5.0 7 1 G glycine 4.3 6 1 H histidine 0.7 1 1 I isoleucine 2.2 3 1 K lysine 2.9 4 1 L leucine 10.8 15 2 M methionine 0.7 1 1 N asparagine 0.0 0 0 P proline 9.4 13 1 Q glutamine 5.8 8 1 R arginine 8.6 12 2 S serine 7.9 11 2 T threonine 5.0 7 1 V valine 4.3 6 1 W tryptophan 4.3 6 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 10 isoform g CAPN10 0.627 calpain 10 isoform c CAPN10 0.627 calpain 10 isoform a CAPN10 0.272 calpain 10 isoform h CAPN12 0.145 calpain 12 CAPN3 0.145 calpain 3 isoform a CAPN3 0.145 calpain 3 isoform b CAPN3 0.145 calpain 3 isoform c CAPN5 0.134 calpain 5 CAPN2 0.130 calpain 2 isoform 1 CAPN8 0.116 calpain 8 CAPN11 0.116 calpain 11 CAPN1 0.116 calpain 1, large subunit CAPN9 0.101 calpain 9 isoform 2 CAPN9 0.101 calpain 9 isoform 1 CAPN14 0.098 calpain 14 CAPN3 0.087 calpain 3 isoform f CAPN13 0.083 calpain 13 SOLH 0.054 small optic lobes CAPN2 0.051 calpain 2 isoform 2 CAPN6 0.051 calpain 6 CCNJL 0.011 cyclin J-like PKHD1L1 0.011 fibrocystin L KCNIP3 0.007 Kv channel interacting protein 3 isoform 1 C9orf144B 0.007 hypothetical protein LOC259308 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.