LOC100127899 22084

Name: LOC100127899	Sequence: fasta or formatted (377aa)		NCBI GI: 239754648
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt prot {191aa} PREDICTED: hypothetical protein alt prot {369aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 37 3 C cysteine 1.3 5 1 D aspartate 3.2 12 1 E glutamate 5.6 21 2 F phenylalanine 1.9 7 1 G glycine 14.9 56 2 H histidine 6.9 26 2 I isoleucine 2.9 11 1 K lysine 1.6 6 1 L leucine 7.7 29 2 M methionine 0.8 3 1 N asparagine 0.8 3 1 P proline 9.3 35 3 Q glutamine 7.2 27 2 R arginine 5.8 22 2 S serine 4.8 18 1 T threonine 3.7 14 1 V valine 9.5 36 2 W tryptophan 1.6 6 1 Y tyrosine 0.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100127899 0.910 PREDICTED: hypothetical protein LOC100134498 0.910 PREDICTED: hypothetical protein LOC100127899 0.501 PREDICTED: hypothetical protein COL5A3 0.035 collagen, type V, alpha 3 preproprotein COL4A6 0.018 type IV alpha 6 collagen isoform A precursor COL4A6 0.018 type IV alpha 6 collagen isoform B precursor COL2A1 0.017 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.017 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL4A3 0.017 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.017 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.017 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.017 alpha 3 type IV collagen isoform 1 precursor WDR33 0.017 WD repeat domain 33 isoform 1 COL1A1 0.016 alpha 1 type I collagen preproprotein COL7A1 0.016 alpha 1 type VII collagen precursor COL4A4 0.016 alpha 4 type IV collagen precursor COL6A6 0.014 collagen type VI alpha 6 COL11A1 0.013 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.013 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.013 alpha 1 type XI collagen isoform A preproprotein [Ho... C1QA 0.013 complement component 1, q subcomponent, A chain precu... COL28A1 0.013 collagen, type XXVIII precursor COL22A1 0.013 collagen, type XXII, alpha 1 COL5A2 0.013 alpha 2 type V collagen preproprotein COL4A1 0.012 alpha 1 type IV collagen preproprotein COL3A1 0.012 collagen type III alpha 1 preproprotein COL9A2 0.012 alpha 2 type IX collagen COL9A3 0.010 alpha 3 type IX collagen COL13A1 0.010 alpha 1 type XIII collagen isoform 12 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.