COL4A3 36876

Name: COL4A3	Sequence: fasta or formatted (1670aa)		NCBI GI: 89142730
Description: alpha 3 type IV collagen isoform 1 precursor		Referenced in: Collagen
Other entries for this name: alt prot [1637aa] alpha 3 type IV collagen isoform 2 precursor alt prot [1494aa] alpha 3 type IV collagen isoform 4 precursor alt prot [1424aa] alpha 3 type IV collagen isoform 5 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 69 3 C cysteine 1.4 24 1 D aspartate 3.2 53 1 E glutamate 4.0 67 2 F phenylalanine 2.8 46 2 G glycine 27.2 455 2 H histidine 1.1 19 1 I isoleucine 3.1 51 2 K lysine 5.3 89 2 L leucine 6.3 106 3 M methionine 1.7 29 2 N asparagine 1.7 28 1 P proline 19.2 320 2 Q glutamine 2.9 48 2 R arginine 3.9 65 2 S serine 4.7 78 2 T threonine 3.5 59 2 V valine 2.4 40 1 W tryptophan 0.4 6 1 Y tyrosine 1.1 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 3 type IV collagen isoform 1 precursor COL4A3 0.951 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.893 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.852 alpha 3 type IV collagen isoform 5 precursor COL4A5 0.492 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.491 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.490 type IV collagen alpha 5 isoform 2 precursor COL4A1 0.459 alpha 1 type IV collagen preproprotein COL4A6 0.375 type IV alpha 6 collagen isoform B precursor COL4A6 0.375 type IV alpha 6 collagen isoform A precursor COL4A2 0.369 alpha 2 type IV collagen preproprotein COL4A4 0.339 alpha 4 type IV collagen precursor COL7A1 0.287 alpha 1 type VII collagen precursor COL5A1 0.235 alpha 1 type V collagen preproprotein COL3A1 0.234 collagen type III alpha 1 preproprotein COL5A2 0.233 alpha 2 type V collagen preproprotein COL11A1 0.227 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.227 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.227 alpha 1 type XI collagen isoform A preproprotein [Ho... COL5A3 0.227 collagen, type V, alpha 3 preproprotein COL11A2 0.226 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL2A1 0.226 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL11A2 0.226 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL2A1 0.226 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL11A2 0.226 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL16A1 0.223 alpha 1 type XVI collagen precursor COL1A1 0.222 alpha 1 type I collagen preproprotein COL22A1 0.219 collagen, type XXII, alpha 1 COL1A2 0.207 alpha 2 type I collagen COL27A1 0.205 collagen, type XXVII, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.