COL5A3 788

Name: COL5A3	Sequence: fasta or formatted (1745aa)		NCBI GI: 110735435
Description: collagen, type V, alpha 3 preproprotein		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 102 3 C cysteine 0.7 12 1 D aspartate 4.4 76 2 E glutamate 5.8 101 2 F phenylalanine 2.6 46 1 G glycine 24.6 429 2 H histidine 1.3 23 1 I isoleucine 2.2 38 1 K lysine 4.9 86 2 L leucine 7.0 122 3 M methionine 0.7 12 2 N asparagine 1.4 24 1 P proline 16.6 290 3 Q glutamine 4.5 78 2 R arginine 4.8 84 5 S serine 4.0 69 3 T threonine 3.8 67 2 V valine 3.8 67 2 W tryptophan 0.5 8 1 Y tyrosine 0.6 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 collagen, type V, alpha 3 preproprotein COL11A1 0.565 alpha 1 type XI collagen isoform B preproprotein [Ho... COL5A1 0.565 alpha 1 type V collagen preproprotein COL11A1 0.564 alpha 1 type XI collagen isoform A preproprotein [Ho... COL11A1 0.563 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A2 0.507 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL11A2 0.503 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.471 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL2A1 0.308 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL2A1 0.308 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL1A1 0.301 alpha 1 type I collagen preproprotein COL5A2 0.299 alpha 2 type V collagen preproprotein COL3A1 0.292 collagen type III alpha 1 preproprotein COL1A2 0.266 alpha 2 type I collagen COL4A5 0.253 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.252 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.251 type IV collagen alpha 5 isoform 3 precursor COL27A1 0.247 collagen, type XXVII, alpha 1 COL7A1 0.240 alpha 1 type VII collagen precursor COL4A3 0.239 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.239 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.239 alpha 3 type IV collagen isoform 1 precursor COL4A1 0.236 alpha 1 type IV collagen preproprotein COL4A3 0.236 alpha 3 type IV collagen isoform 5 precursor COL24A1 0.233 collagen, type XXIV, alpha 1 COL4A4 0.231 alpha 4 type IV collagen precursor COL22A1 0.224 collagen, type XXII, alpha 1 COL4A2 0.217 alpha 2 type IV collagen preproprotein COL16A1 0.214 alpha 1 type XVI collagen precursor COL4A6 0.212 type IV alpha 6 collagen isoform A precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.