COL4A3 36878

Name: COL4A3	Sequence: fasta or formatted (1494aa)		NCBI GI: 89142735
Description: alpha 3 type IV collagen isoform 4 precursor		Referenced in: Collagen
Other entries for this name: alt prot [1670aa] alpha 3 type IV collagen isoform 1 precursor alt prot [1637aa] alpha 3 type IV collagen isoform 2 precursor alt prot [1424aa] alpha 3 type IV collagen isoform 5 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.7 56 3 C cysteine 0.9 13 1 D aspartate 3.3 50 1 E glutamate 3.9 59 2 F phenylalanine 2.4 36 2 G glycine 29.6 442 2 H histidine 1.1 16 1 I isoleucine 2.7 41 2 K lysine 5.6 83 2 L leucine 6.4 95 3 M methionine 1.5 22 2 N asparagine 1.3 20 1 P proline 20.5 306 2 Q glutamine 3.0 45 2 R arginine 3.7 55 2 S serine 4.0 60 2 T threonine 3.1 47 2 V valine 2.3 34 1 W tryptophan 0.1 2 1 Y tyrosine 0.8 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.996 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.996 alpha 3 type IV collagen isoform 1 precursor COL4A3 0.950 alpha 3 type IV collagen isoform 5 precursor COL4A5 0.459 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.458 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.457 type IV collagen alpha 5 isoform 2 precursor COL4A1 0.420 alpha 1 type IV collagen preproprotein COL4A6 0.348 type IV alpha 6 collagen isoform B precursor COL4A6 0.347 type IV alpha 6 collagen isoform A precursor COL4A2 0.338 alpha 2 type IV collagen preproprotein COL7A1 0.320 alpha 1 type VII collagen precursor COL4A4 0.309 alpha 4 type IV collagen precursor COL5A1 0.262 alpha 1 type V collagen preproprotein COL3A1 0.261 collagen type III alpha 1 preproprotein COL5A2 0.260 alpha 2 type V collagen preproprotein COL11A1 0.253 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.253 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.253 alpha 1 type XI collagen isoform A preproprotein [Ho... COL5A3 0.253 collagen, type V, alpha 3 preproprotein COL11A2 0.252 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL2A1 0.252 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL11A2 0.252 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL2A1 0.252 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL11A2 0.252 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL16A1 0.248 alpha 1 type XVI collagen precursor COL1A1 0.247 alpha 1 type I collagen preproprotein COL22A1 0.244 collagen, type XXII, alpha 1 COL1A2 0.231 alpha 2 type I collagen COL27A1 0.229 collagen, type XXVII, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.