COL4A3 36879

Name: COL4A3	Sequence: fasta or formatted (1424aa)		NCBI GI: 89142737
Description: alpha 3 type IV collagen isoform 5 precursor		Referenced in: Collagen
Other entries for this name: alt prot [1670aa] alpha 3 type IV collagen isoform 1 precursor alt prot [1637aa] alpha 3 type IV collagen isoform 2 precursor alt prot [1494aa] alpha 3 type IV collagen isoform 4 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.7 52 3 C cysteine 0.8 12 1 D aspartate 3.3 47 1 E glutamate 4.1 58 2 F phenylalanine 2.2 31 2 G glycine 30.2 430 2 H histidine 1.0 14 1 I isoleucine 2.8 40 2 K lysine 5.7 81 2 L leucine 6.3 90 3 M methionine 1.5 22 2 N asparagine 1.3 19 1 P proline 21.1 300 2 Q glutamine 2.9 41 2 R arginine 3.6 51 2 S serine 3.7 53 2 T threonine 2.8 40 1 V valine 2.2 31 1 W tryptophan 0.1 1 1 Y tyrosine 0.8 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.995 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.995 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.995 alpha 3 type IV collagen isoform 1 precursor COL4A5 0.455 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.454 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.453 type IV collagen alpha 5 isoform 2 precursor COL4A1 0.418 alpha 1 type IV collagen preproprotein COL4A6 0.344 type IV alpha 6 collagen isoform B precursor COL4A6 0.344 type IV alpha 6 collagen isoform A precursor COL4A2 0.331 alpha 2 type IV collagen preproprotein COL7A1 0.330 alpha 1 type VII collagen precursor COL4A4 0.324 alpha 4 type IV collagen precursor COL3A1 0.273 collagen type III alpha 1 preproprotein COL5A2 0.272 alpha 2 type V collagen preproprotein COL5A1 0.269 alpha 1 type V collagen preproprotein COL11A1 0.265 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.265 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.265 alpha 1 type XI collagen isoform A preproprotein [Ho... COL11A2 0.261 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL2A1 0.261 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.261 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL11A2 0.260 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.260 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL16A1 0.260 alpha 1 type XVI collagen precursor COL1A1 0.259 alpha 1 type I collagen preproprotein COL5A3 0.258 collagen, type V, alpha 3 preproprotein COL22A1 0.253 collagen, type XXII, alpha 1 COL1A2 0.253 alpha 2 type I collagen COL27A1 0.239 collagen, type XXVII, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.