Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

BLASTP matches in selected species for LOC100127899 - GI:239754648

The following table provides the supporting data for the comparative genomics plot for this protein. Select the protein identifier to see the matching RefSeq entry at NCBI. Searches at NCBI may reflect newer proteins sets or multiple strains of that species.

Species          Protein        Score Size(aa) Description

Self-match       239754648        791    377   PREDICTED: hypothetical protein
M. musculus      8393173           50   1739   collagen, type V, alpha 3 
D. rerio         189521704         45   1667   PREDICTED: collagen, type IV, alpha 6...
C. intestinalis  198427839         37   1477   PREDICTED: similar to Col2a1b protein...
S. purpuratus    47550915          37   1752   3 alpha procollagen 
D. melanogaster  24581820          36   1779   Collagen type IV CG4145-PA, isoform A...
C. elegans       17538077          38    291   COLlagen family member (col-74) 
A. thaliana      79314149          32   1069   CEF (CLONE EIGHTY-FOUR); transporter ...
S. cerevisiae    6320596           34    482   Actin-associated protein, subunit of ...
E. coli          89110085          27    205   hypothetical protein 
A. pernix        14602074          27    512   bifunctional GMP synthase/glutamine a...

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press