COL22A1 27566

Name: COL22A1	Sequence: fasta or formatted (1626aa)		NCBI GI: 40805823
Description: collagen, type XXII, alpha 1		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 94 5 C cysteine 1.1 18 2 D aspartate 4.3 70 1 E glutamate 6.4 104 2 F phenylalanine 2.1 34 1 G glycine 24.3 395 4 H histidine 1.2 19 1 I isoleucine 2.8 45 1 K lysine 5.4 87 2 L leucine 6.2 101 3 M methionine 1.2 20 1 N asparagine 1.5 25 1 P proline 16.4 267 7 Q glutamine 3.8 62 2 R arginine 5.2 85 3 S serine 4.1 66 3 T threonine 2.6 42 2 V valine 4.3 70 2 W tryptophan 0.4 6 1 Y tyrosine 1.0 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 collagen, type XXII, alpha 1 LOC100293055 0.509 PREDICTED: similar to COL22A1 protein COL16A1 0.292 alpha 1 type XVI collagen precursor COL4A5 0.269 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.268 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.268 type IV collagen alpha 5 isoform 1 precursor COL5A1 0.259 alpha 1 type V collagen preproprotein COL11A2 0.258 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.254 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL7A1 0.254 alpha 1 type VII collagen precursor COL4A3 0.252 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.252 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.252 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.252 alpha 3 type IV collagen isoform 1 precursor COL4A1 0.251 alpha 1 type IV collagen preproprotein COL3A1 0.251 collagen type III alpha 1 preproprotein COL2A1 0.249 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL4A4 0.248 alpha 4 type IV collagen precursor COL11A1 0.248 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.248 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.248 alpha 1 type XI collagen isoform A preproprotein [Ho... COL2A1 0.248 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL11A2 0.247 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL1A1 0.244 alpha 1 type I collagen preproprotein COL5A2 0.244 alpha 2 type V collagen preproprotein COL5A3 0.241 collagen, type V, alpha 3 preproprotein COL4A2 0.233 alpha 2 type IV collagen preproprotein COL4A6 0.231 type IV alpha 6 collagen isoform A precursor COL4A6 0.231 type IV alpha 6 collagen isoform B precursor COL1A2 0.221 alpha 2 type I collagen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.