LOC100291076 20830

Name: LOC100291076	Sequence: fasta or formatted (870aa)		NCBI GI: 239751471
Description: PREDICTED: hypothetical protein XP_002347846		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.7 102 4 C cysteine 2.2 19 1 D aspartate 2.1 18 2 E glutamate 4.1 36 1 F phenylalanine 2.4 21 1 G glycine 14.6 127 2 H histidine 2.1 18 1 I isoleucine 2.2 19 2 K lysine 2.0 17 1 L leucine 11.7 102 3 M methionine 0.5 4 1 N asparagine 0.8 7 1 P proline 10.7 93 3 Q glutamine 4.6 40 2 R arginine 9.4 82 5 S serine 7.1 62 2 T threonine 4.0 35 2 V valine 5.7 50 2 W tryptophan 1.1 10 2 Y tyrosine 0.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002347846 LOC100287104 0.313 PREDICTED: hypothetical protein XP_002343630 COL1A2 0.024 alpha 2 type I collagen COL2A1 0.022 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.022 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL11A1 0.020 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.020 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.020 alpha 1 type XI collagen isoform A preproprotein [Ho... COL5A1 0.020 alpha 1 type V collagen preproprotein COL3A1 0.019 collagen type III alpha 1 preproprotein COL22A1 0.019 collagen, type XXII, alpha 1 COL5A3 0.018 collagen, type V, alpha 3 preproprotein COL1A1 0.018 alpha 1 type I collagen preproprotein COL4A6 0.018 type IV alpha 6 collagen isoform A precursor COL4A6 0.018 type IV alpha 6 collagen isoform B precursor TAF4 0.018 TBP-associated factor 4 COL5A2 0.017 alpha 2 type V collagen preproprotein COL16A1 0.017 alpha 1 type XVI collagen precursor SAMD1 0.016 sterile alpha motif domain containing 1 COL4A4 0.015 alpha 4 type IV collagen precursor COL6A2 0.015 alpha 2 type VI collagen isoform 2C2a' precursor [H... COL6A2 0.015 alpha 2 type VI collagen isoform 2C2a precursor [Ho... COL6A2 0.015 alpha 2 type VI collagen isoform 2C2 precursor [Hom... COL13A1 0.014 alpha 1 type XIII collagen isoform 18 COL13A1 0.014 alpha 1 type XIII collagen isoform 16 COL4A2 0.014 alpha 2 type IV collagen preproprotein COL19A1 0.014 alpha 1 type XIX collagen precursor LOC100130360 0.014 PREDICTED: hypothetical protein LOC100291828 0.014 PREDICTED: hypothetical protein XP_002344932 LOC100288926 0.014 PREDICTED: hypothetical protein XP_002343509 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.