COL1A2 31133

Name: COL1A2	Sequence: fasta or formatted (1366aa)		NCBI GI: 48762934
Description: alpha 2 type I collagen		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 129 2 C cysteine 0.7 9 1 D aspartate 3.1 43 1 E glutamate 4.8 66 2 F phenylalanine 1.6 22 2 G glycine 27.9 381 3 H histidine 1.1 15 2 I isoleucine 2.3 32 2 K lysine 3.7 50 2 L leucine 4.5 61 4 M methionine 0.7 10 1 N asparagine 3.0 41 2 P proline 17.0 232 2 Q glutamine 2.4 33 1 R arginine 5.3 72 1 S serine 3.8 52 2 T threonine 3.1 42 1 V valine 4.0 55 2 W tryptophan 0.4 5 1 Y tyrosine 1.2 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 2 type I collagen COL1A1 0.626 alpha 1 type I collagen preproprotein COL2A1 0.625 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.625 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A2 0.534 alpha 2 type V collagen preproprotein COL3A1 0.526 collagen type III alpha 1 preproprotein COL5A1 0.375 alpha 1 type V collagen preproprotein COL11A1 0.370 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.370 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.370 alpha 1 type XI collagen isoform A preproprotein [Ho... COL11A2 0.347 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.347 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.347 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL5A3 0.342 collagen, type V, alpha 3 preproprotein COL24A1 0.301 collagen, type XXIV, alpha 1 COL7A1 0.299 alpha 1 type VII collagen precursor COL27A1 0.299 collagen, type XXVII, alpha 1 COL4A5 0.296 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.295 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.295 type IV collagen alpha 5 isoform 3 precursor COL4A4 0.284 alpha 4 type IV collagen precursor COL4A1 0.282 alpha 1 type IV collagen preproprotein COL4A3 0.278 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.278 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.278 alpha 3 type IV collagen isoform 1 precursor COL4A3 0.278 alpha 3 type IV collagen isoform 5 precursor COL4A2 0.264 alpha 2 type IV collagen preproprotein COL22A1 0.263 collagen, type XXII, alpha 1 COL4A6 0.262 type IV alpha 6 collagen isoform A precursor COL4A6 0.262 type IV alpha 6 collagen isoform B precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.