| Name: LOC100288926 | Sequence: fasta or formatted (177aa) | NCBI GI: 239745514 | |
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Description: PREDICTED: hypothetical protein XP_002343509
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 15.8 28 2 C cysteine 2.3 4 1 D aspartate 2.3 4 1 E glutamate 4.0 7 1 F phenylalanine 0.6 1 1 G glycine 11.9 21 2 H histidine 0.6 1 1 I isoleucine 0.6 1 1 K lysine 0.0 0 0 L leucine 9.0 16 1 M methionine 1.7 3 1 N asparagine 0.6 1 1 P proline 15.3 27 2 Q glutamine 0.0 0 0 R arginine 18.1 32 3 S serine 8.5 15 2 T threonine 2.8 5 1 V valine 5.6 10 1 W tryptophan 0.6 1 1 Y tyrosine 0.0 0 0 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343509 LOC100291828 1.000 PREDICTED: hypothetical protein XP_002344932 LOC100127891 0.075 PREDICTED: hypothetical protein PRB1 0.072 proline-rich protein BstNI subfamily 1 isoform 1 pre... LOC100291076 0.072 PREDICTED: hypothetical protein XP_002347846 LOC100287104 0.072 PREDICTED: hypothetical protein XP_002343630 LRRC38 0.066 PREDICTED: leucine rich repeat containing 38 LRRC38 0.066 PREDICTED: leucine rich repeat containing 38 LOC100129571 0.066 PREDICTED: similar to hCG1646049 LOC100129571 0.066 PREDICTED: similar to hCG1646049 LOC100129571 0.066 PREDICTED: similar to hCG1646049 TAF4 0.066 TBP-associated factor 4 TTBK1 0.060 tau tubulin kinase 1 CITED4 0.060 Cbp/p300-interacting transactivator, with Glu/Asp-ri... SCARF2 0.060 scavenger receptor class F, member 2 isoform 1 [Homo... SCARF2 0.060 scavenger receptor class F, member 2 isoform 2 [Homo... POM121C 0.060 POM121 membrane glycoprotein (rat)-like SYNJ1 0.057 synaptojanin 1 isoform a SYNJ1 0.057 synaptojanin 1 isoform b POM121 0.057 nuclear pore membrane protein 121 SAMD1 0.057 sterile alpha motif domain containing 1 DIAPH1 0.057 diaphanous 1 isoform 2 DIAPH1 0.057 diaphanous 1 isoform 1 LOC100292723 0.057 PREDICTED: hypothetical protein RBM42 0.057 RNA binding motif protein 42 SMARCA4 0.054 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.054 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.054 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.054 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.054 SWI/SNF-related matrix-associated actin-dependent r...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
