| Name: TAF4 | Sequence: fasta or formatted (1085aa) | NCBI GI: 110832843 | |
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Description: TBP-associated factor 4
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Referenced in: RNA Polymerase and General Transcription Factors
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 16.5 179 5 C cysteine 0.5 5 1 D aspartate 2.2 24 4 E glutamate 3.8 41 2 F phenylalanine 1.5 16 2 G glycine 8.4 91 4 H histidine 1.3 14 4 I isoleucine 2.6 28 2 K lysine 4.0 43 2 L leucine 8.1 88 3 M methionine 1.3 14 1 N asparagine 2.5 27 2 P proline 14.5 157 6 Q glutamine 7.8 85 3 R arginine 4.7 51 2 S serine 6.6 72 3 T threonine 7.1 77 3 V valine 6.2 67 2 W tryptophan 0.0 0 0 Y tyrosine 0.6 6 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 TBP-associated factor 4 TAF4B 0.155 TAF4b RNA polymerase II, TATA box binding protein (... NACA 0.062 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.054 PREDICTED: hypothetical protein LOC80164 FLJ22184 0.053 PREDICTED: hypothetical protein FLJ22184 FMN2 0.051 formin 2 PRG4 0.048 proteoglycan 4 isoform D PRG4 0.048 proteoglycan 4 isoform C PRG4 0.048 proteoglycan 4 isoform B PRG4 0.048 proteoglycan 4 isoform A FLJ22184 0.042 PREDICTED: hypothetical protein FLJ22184 PRB2 0.041 proline-rich protein BstNI subfamily 2 COL1A1 0.041 alpha 1 type I collagen preproprotein COL2A1 0.040 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.040 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL17A1 0.038 alpha 1 type XVII collagen COL3A1 0.038 collagen type III alpha 1 preproprotein MLL4 0.038 myeloid/lymphoid or mixed-lineage leukemia 4 SRCAP 0.037 Snf2-related CBP activator protein RAPH1 0.037 Ras association and pleckstrin homology domains 1 is... COL18A1 0.037 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.037 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.037 alpha 1 type XVIII collagen isoform 1 precursor [Ho... MUC2 0.037 mucin 2 precursor KIAA0754 0.036 hypothetical protein LOC643314 COL5A1 0.036 alpha 1 type V collagen preproprotein PCLO 0.036 piccolo isoform 2 PCLO 0.036 piccolo isoform 1 PRB1 0.036 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB3 0.036 proline-rich protein BstNI subfamily 3 precursor [H...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
