LOC100287104 18627

Name: LOC100287104	Sequence: fasta or formatted (538aa)		NCBI GI: 239745974
Description: PREDICTED: hypothetical protein XP_002343630		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.7 79 3 C cysteine 2.6 14 2 D aspartate 1.1 6 1 E glutamate 3.2 17 1 F phenylalanine 3.0 16 1 G glycine 12.5 67 3 H histidine 0.9 5 1 I isoleucine 0.6 3 1 K lysine 0.9 5 1 L leucine 8.4 45 2 M methionine 1.3 7 1 N asparagine 1.1 6 1 P proline 14.9 80 8 Q glutamine 2.2 12 2 R arginine 13.0 70 5 S serine 9.5 51 3 T threonine 3.5 19 2 V valine 4.8 26 2 W tryptophan 1.5 8 1 Y tyrosine 0.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343630 LOC100291076 0.505 PREDICTED: hypothetical protein XP_002347846 COL3A1 0.036 collagen type III alpha 1 preproprotein COL1A1 0.032 alpha 1 type I collagen preproprotein TAF4 0.032 TBP-associated factor 4 COL2A1 0.031 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.031 collagen, type II, alpha 1 isoform 2 precursor [Hom... LOC100287920 0.030 PREDICTED: hypothetical protein XP_002344198 COL17A1 0.029 alpha 1 type XVII collagen NACA 0.029 nascent polypeptide-associated complex alpha subuni... COL11A1 0.029 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.029 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.029 alpha 1 type XI collagen isoform A preproprotein [Ho... COL5A1 0.028 alpha 1 type V collagen preproprotein COL9A3 0.028 alpha 3 type IX collagen OGFR 0.027 opioid growth factor receptor COL4A2 0.027 alpha 2 type IV collagen preproprotein ANKRD33B 0.027 PREDICTED: ankyrin repeat domain 33B COL1A2 0.026 alpha 2 type I collagen COL18A1 0.026 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.026 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.026 alpha 1 type XVIII collagen isoform 1 precursor [Ho... SAMD1 0.026 sterile alpha motif domain containing 1 FLJ31945 0.025 PREDICTED: hypothetical protein FLJ31945 0.025 PREDICTED: hypothetical protein COL4A5 0.025 type IV collagen alpha 5 isoform 1 precursor COL4A4 0.025 alpha 4 type IV collagen precursor SFRS15 0.025 splicing factor, arginine/serine-rich 15 isoform 3 ... WIPF3 0.025 WAS/WASL interacting protein family, member 3 [Homo... SHANK1 0.025 SH3 and multiple ankyrin repeat domains 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.