COL4A2 1732

Name: COL4A2	Sequence: fasta or formatted (1712aa)		NCBI GI: 116256354
Description: alpha 2 type IV collagen preproprotein		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 82 2 C cysteine 1.2 21 1 D aspartate 4.8 82 2 E glutamate 3.5 60 2 F phenylalanine 3.3 57 2 G glycine 27.6 473 3 H histidine 1.1 19 1 I isoleucine 3.7 63 2 K lysine 4.7 81 2 L leucine 6.0 102 3 M methionine 1.5 25 2 N asparagine 1.1 18 1 P proline 16.7 286 3 Q glutamine 3.6 62 2 R arginine 4.6 79 2 S serine 3.7 64 1 T threonine 3.0 51 2 V valine 2.9 50 1 W tryptophan 0.5 9 1 Y tyrosine 1.6 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 2 type IV collagen preproprotein COL4A6 0.435 type IV alpha 6 collagen isoform A precursor COL4A6 0.435 type IV alpha 6 collagen isoform B precursor COL4A4 0.400 alpha 4 type IV collagen precursor COL4A5 0.391 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.390 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.390 type IV collagen alpha 5 isoform 1 precursor COL4A1 0.355 alpha 1 type IV collagen preproprotein COL4A3 0.326 alpha 3 type IV collagen isoform 1 precursor COL4A3 0.298 alpha 3 type IV collagen isoform 2 precursor COL7A1 0.265 alpha 1 type VII collagen precursor COL4A3 0.261 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.256 alpha 3 type IV collagen isoform 5 precursor COL5A1 0.217 alpha 1 type V collagen preproprotein COL2A1 0.215 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.214 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL1A1 0.211 alpha 1 type I collagen preproprotein COL3A1 0.210 collagen type III alpha 1 preproprotein COL5A2 0.210 alpha 2 type V collagen preproprotein COL11A2 0.209 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.209 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL11A2 0.207 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL5A3 0.205 collagen, type V, alpha 3 preproprotein COL1A2 0.205 alpha 2 type I collagen COL22A1 0.204 collagen, type XXII, alpha 1 COL11A1 0.204 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.204 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.204 alpha 1 type XI collagen isoform A preproprotein [Ho... COL16A1 0.197 alpha 1 type XVI collagen precursor COL27A1 0.193 collagen, type XXVII, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.