SFTPD 34005

Name: SFTPD	Sequence: fasta or formatted (375aa)		NCBI GI: 61699226
Description: pulmonary surfactant-associated protein D precursor		Referenced in: Lung Extracellular Matrix
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 36 2 C cysteine 1.6 6 1 D aspartate 3.5 13 2 E glutamate 6.7 25 1 F phenylalanine 2.7 10 1 G glycine 19.5 73 2 H histidine 0.5 2 1 I isoleucine 1.1 4 1 K lysine 6.1 23 2 L leucine 7.5 28 2 M methionine 2.1 8 1 N asparagine 2.7 10 1 P proline 10.4 39 2 Q glutamine 5.3 20 2 R arginine 3.7 14 1 S serine 5.9 22 2 T threonine 3.7 14 1 V valine 5.6 21 2 W tryptophan 0.5 2 1 Y tyrosine 1.3 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 pulmonary surfactant-associated protein D precursor ... COL1A1 0.217 alpha 1 type I collagen preproprotein COL2A1 0.216 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.216 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL3A1 0.211 collagen type III alpha 1 preproprotein COL5A3 0.208 collagen, type V, alpha 3 preproprotein COLEC12 0.207 collectin sub-family member 12 COL5A1 0.205 alpha 1 type V collagen preproprotein COL11A2 0.204 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.204 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.204 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL9A3 0.204 alpha 3 type IX collagen COL23A1 0.203 collagen, type XXIII, alpha 1 COL5A2 0.200 alpha 2 type V collagen preproprotein LOC100293055 0.200 PREDICTED: similar to COL22A1 protein COL22A1 0.200 collagen, type XXII, alpha 1 COL13A1 0.199 alpha 1 type XIII collagen isoform 15 COL13A1 0.199 alpha 1 type XIII collagen isoform 13 MBL2 0.197 soluble mannose-binding lectin precursor COL11A1 0.196 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.196 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.196 alpha 1 type XI collagen isoform A preproprotein [Ho... COL1A2 0.195 alpha 2 type I collagen COL17A1 0.193 alpha 1 type XVII collagen COL16A1 0.193 alpha 1 type XVI collagen precursor COL13A1 0.193 alpha 1 type XIII collagen isoform 12 COL13A1 0.193 alpha 1 type XIII collagen isoform 11 COL13A1 0.193 alpha 1 type XIII collagen isoform 8 COL13A1 0.192 alpha 1 type XIII collagen isoform 6 COL8A2 0.192 collagen, type VIII, alpha 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.