COL29A1 9827

Name: COL29A1	Sequence: fasta or formatted (2526aa)		NCBI GI: 183583553
Description: collagen, type XXIX, alpha 1		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 132 2 C cysteine 1.4 36 3 D aspartate 6.2 156 2 E glutamate 5.6 142 2 F phenylalanine 5.1 129 2 G glycine 9.5 240 2 H histidine 2.2 55 2 I isoleucine 6.2 157 2 K lysine 6.7 170 2 L leucine 8.3 210 2 M methionine 2.1 52 2 N asparagine 5.0 127 3 P proline 4.2 107 3 Q glutamine 5.5 138 3 R arginine 4.9 124 2 S serine 7.2 182 3 T threonine 5.1 130 2 V valine 6.2 157 2 W tryptophan 0.5 13 1 Y tyrosine 2.7 69 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 collagen, type XXIX, alpha 1 COL6A6 0.445 collagen type VI alpha 6 COL6A3 0.199 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.199 alpha 3 type VI collagen isoform 1 precursor COL6A3 0.191 alpha 3 type VI collagen isoform 4 precursor COL6A3 0.073 alpha 3 type VI collagen isoform 3 precursor COL6A3 0.061 alpha 3 type VI collagen isoform 2 precursor COL6A2 0.056 alpha 2 type VI collagen isoform 2C2 precursor [Hom... COL21A1 0.055 collagen, type XXI, alpha 1 precursor COL6A2 0.055 alpha 2 type VI collagen isoform 2C2a' precursor [H... COL6A2 0.055 alpha 2 type VI collagen isoform 2C2a precursor [Ho... COL6A1 0.051 collagen, type VI, alpha 1 precursor COL4A5 0.050 type IV collagen alpha 5 isoform 2 precursor COL5A3 0.049 collagen, type V, alpha 3 preproprotein COL9A1 0.049 alpha 1 type IX collagen isoform 1 precursor COL9A1 0.049 alpha 1 type IX collagen isoform 2 precursor COL27A1 0.049 collagen, type XXVII, alpha 1 COL11A1 0.049 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.049 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.049 alpha 1 type XI collagen isoform A preproprotein [Ho... COL4A5 0.049 type IV collagen alpha 5 isoform 3 precursor COL5A1 0.049 alpha 1 type V collagen preproprotein COL11A2 0.049 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.049 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.049 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL2A1 0.048 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.048 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL4A5 0.048 type IV collagen alpha 5 isoform 1 precursor COL9A2 0.048 alpha 2 type IX collagen COL28A1 0.048 collagen, type XXVIII precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.