COL9A1 35358

Name: COL9A1	Sequence: fasta or formatted (678aa)		NCBI GI: 73486664
Description: alpha 1 type IX collagen isoform 2 precursor		Referenced in: Collagen
Other entries for this name: alt prot [921aa] alpha 1 type IX collagen isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 38 2 C cysteine 1.0 7 1 D aspartate 3.8 26 1 E glutamate 5.3 36 2 F phenylalanine 0.9 6 1 G glycine 29.9 203 1 H histidine 0.7 5 1 I isoleucine 2.7 18 1 K lysine 4.1 28 1 L leucine 6.2 42 4 M methionine 1.3 9 1 N asparagine 1.0 7 1 P proline 19.9 135 2 Q glutamine 3.7 25 2 R arginine 5.8 39 2 S serine 2.7 18 1 T threonine 1.9 13 1 V valine 2.9 20 2 W tryptophan 0.1 1 1 Y tyrosine 0.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 1 type IX collagen isoform 2 precursor COL9A1 0.967 alpha 1 type IX collagen isoform 1 precursor COL9A2 0.519 alpha 2 type IX collagen COL9A3 0.448 alpha 3 type IX collagen COL4A5 0.369 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.368 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.367 type IV collagen alpha 5 isoform 2 precursor LOC100293055 0.363 PREDICTED: similar to COL22A1 protein COL3A1 0.361 collagen type III alpha 1 preproprotein COL2A1 0.358 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL2A1 0.354 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL22A1 0.354 collagen, type XXII, alpha 1 COL1A1 0.354 alpha 1 type I collagen preproprotein COL5A2 0.352 alpha 2 type V collagen preproprotein COL5A1 0.351 alpha 1 type V collagen preproprotein COL27A1 0.348 collagen, type XXVII, alpha 1 COL11A1 0.346 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.346 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.346 alpha 1 type XI collagen isoform A preproprotein [Ho... COL4A1 0.345 alpha 1 type IV collagen preproprotein COL5A3 0.343 collagen, type V, alpha 3 preproprotein COL7A1 0.339 alpha 1 type VII collagen precursor COL11A2 0.339 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.339 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.339 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL16A1 0.338 alpha 1 type XVI collagen precursor COL4A4 0.337 alpha 4 type IV collagen precursor COL4A3 0.337 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.337 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.337 alpha 3 type IV collagen isoform 2 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.