COL24A1 1503

Name: COL24A1	Sequence: fasta or formatted (1714aa)		NCBI GI: 115392133
Description: collagen, type XXIV, alpha 1		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.4 58 2 C cysteine 0.9 15 1 D aspartate 3.5 60 2 E glutamate 6.0 102 2 F phenylalanine 2.5 42 1 G glycine 21.3 365 2 H histidine 2.2 38 1 I isoleucine 5.1 88 2 K lysine 6.1 104 2 L leucine 7.5 128 2 M methionine 1.4 24 1 N asparagine 3.2 54 3 P proline 12.1 207 3 Q glutamine 5.3 90 2 R arginine 3.9 66 2 S serine 5.3 90 3 T threonine 4.6 79 2 V valine 4.0 69 3 W tryptophan 0.3 5 1 Y tyrosine 1.8 30 4			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 collagen, type XXIV, alpha 1 COL27A1 0.383 collagen, type XXVII, alpha 1 COL2A1 0.271 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.271 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL3A1 0.260 collagen type III alpha 1 preproprotein COL5A1 0.258 alpha 1 type V collagen preproprotein COL1A1 0.257 alpha 1 type I collagen preproprotein COL5A2 0.251 alpha 2 type V collagen preproprotein COL1A2 0.247 alpha 2 type I collagen COL5A3 0.244 collagen, type V, alpha 3 preproprotein COL11A2 0.243 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.243 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.243 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL11A1 0.240 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.240 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.240 alpha 1 type XI collagen isoform A preproprotein [Ho... COL4A5 0.220 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.220 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.218 type IV collagen alpha 5 isoform 1 precursor COL4A1 0.218 alpha 1 type IV collagen preproprotein COL7A1 0.213 alpha 1 type VII collagen precursor COL22A1 0.212 collagen, type XXII, alpha 1 COL4A4 0.209 alpha 4 type IV collagen precursor COL4A3 0.208 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.208 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.208 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.208 alpha 3 type IV collagen isoform 1 precursor COL4A2 0.199 alpha 2 type IV collagen preproprotein COL4A6 0.198 type IV alpha 6 collagen isoform A precursor COL4A6 0.198 type IV alpha 6 collagen isoform B precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.