Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 148743793
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148743793 osteoprotegerin precursor [Homo sapiens]
(401 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148743793 osteoprotegerin precursor [Homo sapiens] 852 0.0
gi|14790170 tumor necrosis factor receptor superfamily, member 6... 172 5e-43
gi|4507585 tumor necrosis factor receptor superfamily, member 6b... 172 5e-43
gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi... 128 1e-29
gi|7657039 tumor necrosis factor receptor superfamily, member 21... 115 9e-26
gi|4507581 CD40 antigen isoform 1 precursor [Homo sapiens] 103 3e-22
gi|4507565 tumor necrosis factor receptor superfamily, member 11... 103 4e-22
gi|4505039 lymphotoxin beta receptor [Homo sapiens] 94 3e-19
gi|23312371 CD40 antigen isoform 2 precursor [Homo sapiens] 92 1e-18
gi|23200041 tumor necrosis factor receptor superfamily, member 1... 80 2e-15
gi|4505393 nerve growth factor receptor precursor [Homo sapiens] 72 7e-13
gi|5730095 tumor necrosis factor receptor superfamily, member 9 ... 67 4e-11
gi|68348711 tumor necrosis factor receptor superfamily, member 8... 61 2e-09
gi|4507579 tumor necrosis factor receptor superfamily, member 4 ... 61 2e-09
gi|4507575 tumor necrosis factor receptor 1 precursor [Homo sapi... 60 3e-09
gi|4507583 tumor necrosis factor receptor superfamily, member 6 ... 59 8e-09
gi|22547121 tumor necrosis factor receptor superfamily, member 1... 58 1e-08
gi|23510423 tumor necrosis factor receptor superfamily, member 6... 57 2e-08
gi|22547108 tumor necrosis factor receptor superfamily, member 1... 57 3e-08
gi|21361086 tumor necrosis factor receptor superfamily, member 1... 53 4e-07
gi|4759246 tumor necrosis factor receptor superfamily, member 18... 50 3e-06
gi|23238197 tumor necrosis factor receptor superfamily, member 1... 50 3e-06
gi|224494019 tumor necrosis factor receptor superfamily, member ... 47 2e-05
gi|23238200 RELT tumor necrosis factor receptor precursor [Homo ... 47 2e-05
gi|21361873 RELT tumor necrosis factor receptor precursor [Homo ... 47 2e-05
gi|23200023 tumor necrosis factor receptor superfamily, member 2... 45 9e-05
gi|23200021 tumor necrosis factor receptor superfamily, member 2... 45 9e-05
gi|89142745 tumor necrosis factor receptor superfamily, member 2... 45 9e-05
gi|4507569 tumor necrosis factor receptor superfamily, member 25... 45 9e-05
gi|224494026 tumor necrosis factor receptor superfamily, member ... 44 3e-04
>gi|148743793 osteoprotegerin precursor [Homo sapiens]
Length = 401
Score = 852 bits (2201), Expect = 0.0
Identities = 401/401 (100%), Positives = 401/401 (100%)
Query: 1 MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKT 60
MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKT
Sbjct: 1 MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKT 60
Query: 61 VCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYLEIEFCLK 120
VCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYLEIEFCLK
Sbjct: 61 VCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYLEIEFCLK 120
Query: 121 HRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNAT 180
HRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNAT
Sbjct: 121 HRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNAT 180
Query: 181 HDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVLVDNLPGTKVNAESVERI 240
HDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVLVDNLPGTKVNAESVERI
Sbjct: 181 HDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVLVDNLPGTKVNAESVERI 240
Query: 241 KRQHSSQEQTFQLLKLWKHQNKDQDIVKKIIQDIDLCENSVQRHIGHANLTFEQLRSLME 300
KRQHSSQEQTFQLLKLWKHQNKDQDIVKKIIQDIDLCENSVQRHIGHANLTFEQLRSLME
Sbjct: 241 KRQHSSQEQTFQLLKLWKHQNKDQDIVKKIIQDIDLCENSVQRHIGHANLTFEQLRSLME 300
Query: 301 SLPGKKVGAEDIEKTIKACKPSDQILKLLSLWRIKNGDQDTLKGLMHALKHSKTYHFPKT 360
SLPGKKVGAEDIEKTIKACKPSDQILKLLSLWRIKNGDQDTLKGLMHALKHSKTYHFPKT
Sbjct: 301 SLPGKKVGAEDIEKTIKACKPSDQILKLLSLWRIKNGDQDTLKGLMHALKHSKTYHFPKT 360
Query: 361 VTQSLKKTIRFLHSFTMYKLYQKLFLEMIGNQVQSVKISCL 401
VTQSLKKTIRFLHSFTMYKLYQKLFLEMIGNQVQSVKISCL
Sbjct: 361 VTQSLKKTIRFLHSFTMYKLYQKLFLEMIGNQVQSVKISCL 401
>gi|14790170 tumor necrosis factor receptor superfamily, member 6b
[Homo sapiens]
Length = 300
Score = 172 bits (436), Expect = 5e-43
Identities = 77/187 (41%), Positives = 108/187 (57%), Gaps = 5/187 (2%)
Query: 26 PKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSP 85
P Y D ET +L+C +CPPGT++++ C T C PCP +YT W+ + C YC+
Sbjct: 34 PTYPWRDAETGERLVCAQCPPGTFVQRPCRRDSPTTCGPCPPRHYTQFWNYLERCRYCNV 93
Query: 86 VCKELQYVKQECNRTHNRVCECKEGRYLEIEFCLKHRSCPPGFGVVQAGTPERNTVCKRC 145
+C E + + C+ THNR C C+ G + FCL+H SCPPG GV+ GTP +NT C+ C
Sbjct: 94 LCGEREEEARACHATHNRACRCRTGFFAHAGFCLEHASCPPGAGVIAPGTPSQNTQCQPC 153
Query: 146 PDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDNI---CSGNSESTQKCGIDVTLC 202
P G FS +SS C+ H NC+ GL L G+++HD + C+G ST+ G + C
Sbjct: 154 PPGTFSASSSSSEQCQPHRNCTALGLALNVPGSSSHDTLCTSCTGFPLSTRVPGAEE--C 211
Query: 203 EEAFFRF 209
E A F
Sbjct: 212 ERAVIDF 218
>gi|4507585 tumor necrosis factor receptor superfamily, member 6b
[Homo sapiens]
Length = 300
Score = 172 bits (436), Expect = 5e-43
Identities = 77/187 (41%), Positives = 108/187 (57%), Gaps = 5/187 (2%)
Query: 26 PKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSP 85
P Y D ET +L+C +CPPGT++++ C T C PCP +YT W+ + C YC+
Sbjct: 34 PTYPWRDAETGERLVCAQCPPGTFVQRPCRRDSPTTCGPCPPRHYTQFWNYLERCRYCNV 93
Query: 86 VCKELQYVKQECNRTHNRVCECKEGRYLEIEFCLKHRSCPPGFGVVQAGTPERNTVCKRC 145
+C E + + C+ THNR C C+ G + FCL+H SCPPG GV+ GTP +NT C+ C
Sbjct: 94 LCGEREEEARACHATHNRACRCRTGFFAHAGFCLEHASCPPGAGVIAPGTPSQNTQCQPC 153
Query: 146 PDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDNI---CSGNSESTQKCGIDVTLC 202
P G FS +SS C+ H NC+ GL L G+++HD + C+G ST+ G + C
Sbjct: 154 PPGTFSASSSSSEQCQPHRNCTALGLALNVPGSSSHDTLCTSCTGFPLSTRVPGAEE--C 211
Query: 203 EEAFFRF 209
E A F
Sbjct: 212 ERAVIDF 218
>gi|4507577 tumor necrosis factor receptor 2 precursor [Homo
sapiens]
Length = 461
Score = 128 bits (321), Expect = 1e-29
Identities = 66/166 (39%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 30 HYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKE 89
+YD+ Q+ C KC PG + K CT TVC C D YT W+ ECL C C
Sbjct: 45 YYDQTA--QMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSS 102
Query: 90 LQYVKQECNRTHNRVCECKEGRYLEI------EFCLKHRSCPPGFGVVQAGTPERNTVCK 143
Q Q C R NR+C C+ G Y + C R C PGFGV + GT + VCK
Sbjct: 103 DQVETQACTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCK 162
Query: 144 RCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDNICSGNS 189
C G FSN TSS CR H C+V + GNA+ D +C+ S
Sbjct: 163 PCAPGTFSNTTSSTDICRPHQICNVVAI----PGNASMDAVCTSTS 204
>gi|7657039 tumor necrosis factor receptor superfamily, member 21
precursor [Homo sapiens]
Length = 655
Score = 115 bits (287), Expect = 9e-26
Identities = 56/158 (35%), Positives = 77/158 (48%)
Query: 28 YLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVC 87
Y H D T L CDKCP GTY+ +HCT VC+ CP +T + ++C CS C
Sbjct: 54 YRHVDRATGQVLTCDKCPAGTYVSEHCTNTSLRVCSSCPVGTFTRHENGIEKCHDCSQPC 113
Query: 88 KELQYVKQECNRTHNRVCECKEGRYLEIEFCLKHRSCPPGFGVVQAGTPERNTVCKRCPD 147
K C +R C C G + C H CP G+GV + GT + CK+C
Sbjct: 114 PWPMIEKLPCAALTDRECTCPPGMFQSNATCAPHTVCPVGWGVRKKGTETEDVRCKQCAR 173
Query: 148 GFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDNIC 185
G FS+ SS C+ +T+C L++ + G DN+C
Sbjct: 174 GTFSDVPSSVMKCKAYTDCLSQNLVVIKPGTKETDNVC 211
>gi|4507581 CD40 antigen isoform 1 precursor [Homo sapiens]
Length = 277
Score = 103 bits (257), Expect = 3e-22
Identities = 56/167 (33%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 25 PPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDEC---L 81
PP + + C C PG L CT +T C PC + + D+W+ C
Sbjct: 22 PPTACREKQYLINSQCCSLCQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHK 81
Query: 82 YCSPVCKELQYVKQECNRTHNRVCECKEGRYLE---IEFCLKHRSCPPGFGVVQAGTPER 138
YC P V+Q+ + +C C+EG + E C+ HRSC PGFGV Q T
Sbjct: 82 YCDPNLG--LRVQQKGTSETDTICTCEEGWHCTSEACESCVLHRSCSPGFGVKQIATGVS 139
Query: 139 NTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDNIC 185
+T+C+ CP GFFSN +S+ C T+C L++ Q G D +C
Sbjct: 140 DTICEPCPVGFFSNVSSAFEKCHPWTSCETKDLVVQQAGTNKTDVVC 186
Score = 40.4 bits (93), Expect = 0.003
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 107 CKEGRYLEIEFCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNC 166
C+E +YL C C PG +V T T C C + F + + + C +H C
Sbjct: 26 CREKQYLINSQCCS--LCQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYC 83
Query: 167 SV-FGLLLTQKGNATHDNICS 186
GL + QKG + D IC+
Sbjct: 84 DPNLGLRVQQKGTSETDTICT 104
>gi|4507565 tumor necrosis factor receptor superfamily, member 11a
precursor [Homo sapiens]
Length = 616
Score = 103 bits (256), Expect = 4e-22
Identities = 64/190 (33%), Positives = 85/190 (44%), Gaps = 13/190 (6%)
Query: 4 LLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCA 63
LLC L L ++++ T Y H C+KC PG Y+ CT +VC
Sbjct: 16 LLCALLARLQVALQIAPPCTSEKHYEHLGR------CCNKCEPGKYMSSKCTTTSDSVCL 69
Query: 64 PCPDHYYTDSWHTSDECLYCSPVC---KELQYVKQECNRTHNRVCECKEGRYL--EIEFC 118
PC Y DSW+ D+CL VC K L V N T R C C G + + E C
Sbjct: 70 PCGPDEYLDSWNEEDKCLL-HKVCDTGKALVAVVAG-NSTTPRRCACTAGYHWSQDCECC 127
Query: 119 LKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGN 178
++ C PG G ++TVCK C G+FS+ SS CR TNC+ G + G
Sbjct: 128 RRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPWTNCTFLGKRVEHHGT 187
Query: 179 ATHDNICSGN 188
D +CS +
Sbjct: 188 EKSDAVCSSS 197
>gi|4505039 lymphotoxin beta receptor [Homo sapiens]
Length = 435
Score = 93.6 bits (231), Expect = 3e-19
Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 9/165 (5%)
Query: 34 ETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYV 93
E H++ C +CPPGTY+ C+ TVCA C ++ Y + W+ C C P C + +
Sbjct: 52 EPQHRICCSRCPPGTYVSAKCSRIRDTVCATCAENSYNEHWNYLTICQLCRP-CDPVMGL 110
Query: 94 KQ--ECNRTHNRVCECKEGRY-----LEIEFCLKHRSCPPGF-GVVQAGTPERNTVCKRC 145
++ C C C+ G + LE C CPPG ++ + N C C
Sbjct: 111 EEIAPCTSKRKTQCRCQPGMFCAAWALECTHCELLSDCPPGTEAELKDEVGKGNNHCVPC 170
Query: 146 PDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDNICSGNSE 190
G F N +S A C+ HT C GL+ G A D C E
Sbjct: 171 KAGHFQNTSSPSARCQPHTRCENQGLVEAAPGTAQSDTTCKNPLE 215
Score = 33.1 bits (74), Expect = 0.46
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 100 THNRVCECKEGRYLEIEFCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAP 159
+ N+ C +E Y E + + CPPG V + R+TVC C + ++ +
Sbjct: 38 SENQTCRDQEKEYYEPQHRICCSRCPPGTYVSAKCSRIRDTVCATCAENSYNEHWNYLTI 97
Query: 160 CRKHTNCS-VFGL 171
C+ C V GL
Sbjct: 98 CQLCRPCDPVMGL 110
>gi|23312371 CD40 antigen isoform 2 precursor [Homo sapiens]
Length = 203
Score = 91.7 bits (226), Expect = 1e-18
Identities = 50/146 (34%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 25 PPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDEC---L 81
PP + + C C PG L CT +T C PC + + D+W+ C
Sbjct: 22 PPTACREKQYLINSQCCSLCQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHK 81
Query: 82 YCSPVCKELQYVKQECNRTHNRVCECKEGRYLE---IEFCLKHRSCPPGFGVVQAGTPER 138
YC P V+Q+ + +C C+EG + E C+ HRSC PGFGV Q T
Sbjct: 82 YCDPNLG--LRVQQKGTSETDTICTCEEGWHCTSEACESCVLHRSCSPGFGVKQIATGVS 139
Query: 139 NTVCKRCPDGFFSNETSSKAPCRKHT 164
+T+C+ CP GFFSN +S+ C T
Sbjct: 140 DTICEPCPVGFFSNVSSAFEKCHPWT 165
Score = 40.4 bits (93), Expect = 0.003
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 107 CKEGRYLEIEFCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNC 166
C+E +YL C C PG +V T T C C + F + + + C +H C
Sbjct: 26 CREKQYLINSQCCS--LCQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYC 83
Query: 167 SV-FGLLLTQKGNATHDNICS 186
GL + QKG + D IC+
Sbjct: 84 DPNLGLRVQQKGTSETDTICT 104
>gi|23200041 tumor necrosis factor receptor superfamily, member 14
precursor [Homo sapiens]
Length = 283
Score = 80.5 bits (197), Expect = 2e-15
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 41 CDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVK--QECN 98
C KC PG +K+ C TVC PCP Y + +CL C +C ++ + C+
Sbjct: 54 CPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQ-MCDPAMGLRASRNCS 112
Query: 99 RTHNRVCECKEGRYLEIE------FCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSN 152
RT N VC C G + ++ C + + PG V + GT ++T+C+ CP G FS
Sbjct: 113 RTENAVCGCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFS- 171
Query: 153 ETSSKAPCRKHTNCSVFGLLLTQKGNAT 180
+ C+ T CS L+T+ G T
Sbjct: 172 PNGTLEECQHQTKCS---WLVTKAGAGT 196
Score = 40.0 bits (92), Expect = 0.004
Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 9/111 (8%)
Query: 83 CSPVCKELQYVKQECNRTHNRVCE-CKEGRYLE----IEFCLKHRSCPPGFGVVQAGTPE 137
C P C VK+ C VCE C G Y+ + CL+ + C P G+ +
Sbjct: 53 CCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCS 112
Query: 138 R--NTVCKRCPDGF-FSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDNIC 185
R N VC P F + A CR + S G + + G + D +C
Sbjct: 113 RTENAVCGCSPGHFCIVQDGDHCAACRAYATSSP-GQRVQKGGTESQDTLC 162
>gi|4505393 nerve growth factor receptor precursor [Homo sapiens]
Length = 427
Score = 72.4 bits (176), Expect = 7e-13
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Query: 9 LVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDH 68
L+ L +S+ + Y H E C C G + Q C A +TVC PC D
Sbjct: 18 LLLLGVSLGGAKEACPTGLYTHSGE------CCKACNLGEGVAQPCGAN-QTVCEPCLDS 70
Query: 69 Y-YTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYLEIEF--CLKHRSCP 125
++D ++ C C+ C LQ + C + VC C G Y + C R C
Sbjct: 71 VTFSDVVSATEPCKPCTE-CVGLQSMSAPCVEADDAVCRCAYGYYQDETTGRCEACRVCE 129
Query: 126 PGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNC 166
G G+V + ++NTVC+ CPDG +S+E + PC T C
Sbjct: 130 AGSGLVFSCQDKQNTVCEECPDGTYSDEANHVDPCLPCTVC 170
Score = 57.4 bits (137), Expect = 2e-08
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 28 YLHYDEETSHQL-LCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPV 86
Y +Y +ET+ + C C G+ L C K TVC CPD Y+D + D CL C+ V
Sbjct: 111 YGYYQDETTGRCEACRVCEAGSGLVFSCQDKQNTVCEECPDGTYSDEANHVDPCLPCT-V 169
Query: 87 CKELQYVKQECNRTHNRVCECKEGRYLEIEFCLKHRSCPP 126
C++ + +EC R + CE GR++ RS PP
Sbjct: 170 CEDTERQLRECTRWADAECEEIPGRWIT-------RSTPP 202
>gi|5730095 tumor necrosis factor receptor superfamily, member 9
precursor [Homo sapiens]
Length = 255
Score = 66.6 bits (161), Expect = 4e-11
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 29 LHYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSW--HTSDECLYCSPV 86
L+++ S Q C CP GT+ C +C+PCP + ++ + T D C C V
Sbjct: 16 LNFERTRSLQDPCSNCPAGTF----CDNNRNQICSPCPPNSFSSAGGQRTCDICRQCKGV 71
Query: 87 CKELQYVKQECNRTHNRVCECKEGRYLEIEFC-LKHRSCPPGFGVVQAGTPERNTVCKRC 145
+ ++EC+ T N C+C G + C + + C G + + G CK C
Sbjct: 72 FR----TRKECSSTSNAECDCTPGFHCLGAGCSMCEQDCKQGQELTKKG-------CKDC 120
Query: 146 PDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDNIC 185
G F+++ + CR TNCS+ G + G D +C
Sbjct: 121 CFGTFNDQ--KRGICRPWTNCSLDGKSVLVNGTKERDVVC 158
>gi|68348711 tumor necrosis factor receptor superfamily, member 8
isoform 1 precursor [Homo sapiens]
Length = 595
Score = 61.2 bits (147), Expect = 2e-09
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 30 HYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKE 89
HY ++ + C +CP G + Q C + C YY D +D C C ++
Sbjct: 35 HYYDKAVRRC-CYRCPMGLFPTQQCPQRPTDCRKQCEPDYYLDE---ADRCTACVTCSRD 90
Query: 90 LQYVKQECNRTHNRVCECKEGRYLEIEF------CLKHRSCPPGFGVVQAGTPERNTVCK 143
K C +RVCEC+ G + C H CP G V GT ++NTVC+
Sbjct: 91 DLVEKTPCAWNSSRVCECRPGMFCSTSAVNSCARCFFHSVCPAGMIVKFPGTAQKNTVCE 150
Query: 144 RCPDGFFSNETSSKAPCRKHTNCSV 168
G S +S C++ ++ ++
Sbjct: 151 PASPG-VSPACASPENCKEPSSGTI 174
Score = 28.9 bits (63), Expect = 8.6
Identities = 20/81 (24%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Query: 46 PGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVC 105
PG Q C C YY D C+ CS ++ K C +R C
Sbjct: 225 PGLSPTQPCPEGSGDCRKQCEPDYYLDEAGRCTACVSCS---RDDLVEKTPCAWNSSRTC 281
Query: 106 ECKEGRYLEIEFCLKHRSCPP 126
EC+ G C P
Sbjct: 282 ECRPGMICATSATNSRARCVP 302
>gi|4507579 tumor necrosis factor receptor superfamily, member 4
precursor [Homo sapiens]
Length = 277
Score = 61.2 bits (147), Expect = 2e-09
Identities = 50/184 (27%), Positives = 69/184 (37%), Gaps = 34/184 (18%)
Query: 6 CCALVFLDISIKWTTQETFPPKYLHYDEET--SHQLLCDKCPPGTYLKQHCTAKWKTVCA 63
C AL+ L + + T LH +T S+ C +C PG + C+ TVC
Sbjct: 13 CAALLLLGLGLSTVTG-------LHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQNTVCR 65
Query: 64 PCPDHYYTD--SWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYLEIEFCLKH 121
PC +Y D S C +C+ + KQ C T + VC C+ G
Sbjct: 66 PCGPGFYNDVVSSKPCKPCTWCN--LRSGSERKQLCTATQDTVCRCRAGTQ-------PL 116
Query: 122 RSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATH 181
S PG C CP G FS C+ TNC++ G Q + +
Sbjct: 117 DSYKPGVD------------CAPCPPGHFS--PGDNQACKPWTNCTLAGKHTLQPASNSS 162
Query: 182 DNIC 185
D IC
Sbjct: 163 DAIC 166
Score = 48.1 bits (113), Expect = 1e-05
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 124 CPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSV-FGLLLTQKGNATHD 182
C PG G+V + +NTVC+ C GF+++ SSK PC+ T C++ G Q AT D
Sbjct: 46 CRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSK-PCKPCTWCNLRSGSERKQLCTATQD 104
Query: 183 NICSGNSES----TQKCGIDVTLCEEAFF 207
+C + + + K G+D C F
Sbjct: 105 TVCRCRAGTQPLDSYKPGVDCAPCPPGHF 133
>gi|4507575 tumor necrosis factor receptor 1 precursor [Homo
sapiens]
Length = 455
Score = 60.1 bits (144), Expect = 3e-09
Identities = 49/166 (29%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 27 KYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWK-TVCAPCPDHYYTDSWHTSDECLYCSP 85
KY+H ++ + C KC GTYL C + T C C +T S + CL CS
Sbjct: 48 KYIH---PQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSK 104
Query: 86 VCKELQYVK-QECNRTHNRVCECKEGRYL-----EIEFCLKHRSCPPGFGVVQAGTPERN 139
KE+ V+ C + VC C++ +Y + C C G V + ++N
Sbjct: 105 CRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG-TVHLSCQEKQN 163
Query: 140 TVCKRCPDGFF--SNETSSKAPCRKHTNCSVFGLLLTQKGNATHDN 183
TVC C GFF NE S + C+K C+ L + T D+
Sbjct: 164 TVC-TCHAGFFLRENECVSCSNCKKSLECTKLCLPQIENVKGTEDS 208
>gi|4507583 tumor necrosis factor receptor superfamily, member 6
isoform 1 precursor [Homo sapiens]
Length = 335
Score = 58.9 bits (141), Expect = 8e-09
Identities = 73/284 (25%), Positives = 107/284 (37%), Gaps = 55/284 (19%)
Query: 19 TTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKW-KTVCAPCPD-HYYTDSWHT 76
TT ET + LH+D + H+ CPPG + CT + C PC + YTD H
Sbjct: 42 TTVETQNLEGLHHDGQFCHK----PCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHF 97
Query: 77 SDECLYCSPVCKELQYVKQE--CNRTHNRVCECKEGRYLEIEFCLKHRSCPP----GFGV 130
S +C C +C E ++ E C RT N C CK + C C P G+
Sbjct: 98 SSKCRRCR-LCDEGHGLEVEINCTRTQNTKCRCKPNFFCNSTVC---EHCDPCTKCEHGI 153
Query: 131 VQAGTPERNTVCKRCPDGFFSN------------------ETSSKAPCRKHTNCSVFGLL 172
++ T NT CK +G SN + CRKH
Sbjct: 154 IKECTLTSNTKCKE--EGSRSNLGWLCLLLLPIPLIVWVKRKEVQKTCRKH--------- 202
Query: 173 LTQKGNATHDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVLVDNLPGTKV 232
+K N + N E+ DV L + V T LS + + V
Sbjct: 203 --RKENQGSHESPTLNPETVAINLSDVDLSKYITTIAGVMT------LSQVKGFVRKNGV 254
Query: 233 NAESVERIKRQH--SSQEQTFQLLKLWKHQNKDQDIVKKIIQDI 274
N ++ IK + + EQ QLL+ W + ++ +I+D+
Sbjct: 255 NEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDL 298
>gi|22547121 tumor necrosis factor receptor superfamily, member 10c
precursor [Homo sapiens]
Length = 259
Score = 58.2 bits (139), Expect = 1e-08
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 19 TTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHY-YTDSWHTS 77
T ++ P+ ++ H ++CP G++ +H A C PC + YT++ +
Sbjct: 28 TARQEEVPQQTVAPQQQRHSFKGEECPAGSHRSEHTGA-----CNPCTEGVDYTNASNNE 82
Query: 78 DECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYL---EIEFCLKHRSCPPG 127
C C+ VCK Q K C T + VC+CKEG + E C K CP G
Sbjct: 83 PSCFPCT-VCKSDQKHKSSCTMTRDTVCQCKEGTFRNENSPEMCRKCSRCPSG 134
>gi|23510423 tumor necrosis factor receptor superfamily, member 6
isoform 3 precursor [Homo sapiens]
Length = 220
Score = 57.4 bits (137), Expect = 2e-08
Identities = 43/133 (32%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
Query: 19 TTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKW-KTVCAPCPD-HYYTDSWHT 76
TT ET + LH+D + H+ CPPG + CT + C PC + YTD H
Sbjct: 42 TTVETQNLEGLHHDGQFCHK----PCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHF 97
Query: 77 SDECLYCSPVCKELQYVKQE--CNRTHNRVCECKEGRYLEIEFCLKHRSCPP----GFGV 130
S +C C +C E ++ E C RT N C CK + C C P G+
Sbjct: 98 SSKCRRCR-LCDEGHGLEVEINCTRTQNTKCRCKPNFFCNSTVC---EHCDPCTKCEHGI 153
Query: 131 VQAGTPERNTVCK 143
++ T NT CK
Sbjct: 154 IKECTLTSNTKCK 166
>gi|22547108 tumor necrosis factor receptor superfamily, member 10d
precursor [Homo sapiens]
Length = 386
Score = 57.0 bits (136), Expect = 3e-08
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 42 DKCPPGTYLKQHCTAKWKTVCAPCPDHY-YTDSWHTSDECLYCSPVCKELQYVKQECNRT 100
++CP G++ ++ A C PC + YT + + CL C+ VCK Q K C T
Sbjct: 81 EECPAGSHRSEYTGA-----CNPCTEGVDYTIASNNLPSCLLCT-VCKSGQTNKSSCTTT 134
Query: 101 HNRVCECKEGRYLE---IEFCLKHRS-CPPGFGVVQAGTPERNTVCKRCPDGFFSNETSS 156
+ VC+C++G + + E C R+ CP G V TP + CK + ++
Sbjct: 135 RDTVCQCEKGSFQDKNSPEMCRTCRTGCPRGMVKVSNCTPRSDIKCK----NESAASSTG 190
Query: 157 KAPCRKHTNCSVFGLL 172
K P + T ++ G+L
Sbjct: 191 KTPAAEETVTTILGML 206
>gi|21361086 tumor necrosis factor receptor superfamily, member 10a
[Homo sapiens]
Length = 468
Score = 53.1 bits (126), Expect = 4e-07
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 33 EETSHQLLCDKCPPGTYLKQHCTAKWKTVCAPCPDHY-YTDSWHTSDECLYCSPVCKELQ 91
++ H L + CPPG++ +H A C C + YT++ + CL C+ CK +
Sbjct: 121 QQWEHSPLGELCPPGSHRSEHPGA-----CNRCTEGVGYTNASNNLFACLPCT-ACKSDE 174
Query: 92 YVKQECNRTHNRVCECKEGRYL---EIEFCLK-HRSCPPGFGVVQAGTPERNTVC 142
+ C T N C+CK G + E C K R CP G V+ TP + C
Sbjct: 175 EERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKVKDCTPWSDIEC 229
>gi|4759246 tumor necrosis factor receptor superfamily, member 18
isoform 1 precursor [Homo sapiens]
Length = 241
Score = 50.4 bits (119), Expect = 3e-06
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 120 KHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNA 179
+H CPPG GV G C C G FS + C+ T+C+ FG L GN
Sbjct: 90 RHHPCPPGQGVQSQGKFSFGFQCIDCASGTFSG--GHEGHCKPWTDCTQFGFLTVFPGNK 147
Query: 180 THDNICSGNSESTQKCG 196
TH+ +C S + G
Sbjct: 148 THNAVCVPGSPPAEPLG 164
>gi|23238197 tumor necrosis factor receptor superfamily, member 18
isoform 3 precursor [Homo sapiens]
Length = 234
Score = 50.4 bits (119), Expect = 3e-06
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 120 KHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNA 179
+H CPPG GV G C C G FS + C+ T+C+ FG L GN
Sbjct: 90 RHHPCPPGQGVQSQGKFSFGFQCIDCASGTFSG--GHEGHCKPWTDCTQFGFLTVFPGNK 147
Query: 180 THDNICSGNSESTQKCG 196
TH+ +C S + G
Sbjct: 148 THNAVCVPGSPPAEPLG 164
>gi|224494019 tumor necrosis factor receptor superfamily, member 10b
isoform 1 precursor [Homo sapiens]
Length = 440
Score = 47.4 bits (111), Expect = 2e-05
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 18/142 (12%)
Query: 44 CPPGTYLKQHCTAKWKTVCAPCP-DHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHN 102
CPPG ++ + C C Y+ W+ CL C+ C + C T N
Sbjct: 81 CPPGHHISEDGRD-----CISCKYGQDYSTHWNDLLFCLRCTR-CDSGEVELSPCTTTRN 134
Query: 103 RVCECKEGRYLE---IEFCLKHRS-CPPGFGVVQAGTPERNTVCKRCPDGFFSN------ 152
VC+C+EG + E E C K R+ CP G V TP + C G +
Sbjct: 135 TVCQCEEGTFREEDSPEMCRKCRTGCPRGMVKVGDCTPWSDIECVHKESGTKHSGEVPAV 194
Query: 153 -ETSSKAPCRKHTNCSVFGLLL 173
ET + +P + CS+ G+++
Sbjct: 195 EETVTSSPGTPASPCSLSGIII 216
>gi|23238200 RELT tumor necrosis factor receptor precursor [Homo
sapiens]
Length = 430
Score = 47.4 bits (111), Expect = 2e-05
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 124 CPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDN 183
CPPG P + T+C+ CP G FS S +PC+ H CS++ L Q G AT D
Sbjct: 32 CPPG--EEPDLDPGQGTLCRPCPPGTFSAAWGS-SPCQPHARCSLWRRLEAQVGMATRDT 88
Query: 184 IC 185
+C
Sbjct: 89 LC 90
>gi|21361873 RELT tumor necrosis factor receptor precursor [Homo
sapiens]
Length = 430
Score = 47.4 bits (111), Expect = 2e-05
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 124 CPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNATHDN 183
CPPG P + T+C+ CP G FS S +PC+ H CS++ L Q G AT D
Sbjct: 32 CPPG--EEPDLDPGQGTLCRPCPPGTFSAAWGS-SPCQPHARCSLWRRLEAQVGMATRDT 88
Query: 184 IC 185
+C
Sbjct: 89 LC 90
>gi|23200023 tumor necrosis factor receptor superfamily, member 25
isoform 3 precursor [Homo sapiens]
Length = 380
Score = 45.4 bits (106), Expect = 9e-05
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 15/126 (11%)
Query: 41 CDKCPPGTYLKQHCTAK-WKTVCAPCP-DHYYTDSWHTSDECLYCSPVCKE--LQYVKQE 96
C CP G YLK CT + C CP D + H + EC C C E Q +
Sbjct: 48 CRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQ-ACDEQASQVALEN 106
Query: 97 CNRTHNRVCECKEGRYLEIE----------FCLKHRSCPPGFGVVQAGTPERNTVCKRCP 146
C+ + C CK G ++E + +C C + R+T C C
Sbjct: 107 CSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLCSRRDTDCGTCL 166
Query: 147 DGFFSN 152
GF+ +
Sbjct: 167 PGFYEH 172
>gi|23200021 tumor necrosis factor receptor superfamily, member 25
isoform 1 precursor [Homo sapiens]
Length = 426
Score = 45.4 bits (106), Expect = 9e-05
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 15/126 (11%)
Query: 41 CDKCPPGTYLKQHCTAK-WKTVCAPCP-DHYYTDSWHTSDECLYCSPVCKE--LQYVKQE 96
C CP G YLK CT + C CP D + H + EC C C E Q +
Sbjct: 48 CRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQ-ACDEQASQVALEN 106
Query: 97 CNRTHNRVCECKEGRYLEIE----------FCLKHRSCPPGFGVVQAGTPERNTVCKRCP 146
C+ + C CK G ++E + +C C + R+T C C
Sbjct: 107 CSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLCSRRDTDCGTCL 166
Query: 147 DGFFSN 152
GF+ +
Sbjct: 167 PGFYEH 172
>gi|89142745 tumor necrosis factor receptor superfamily, member 25
isoform 12 precursor [Homo sapiens]
Length = 181
Score = 45.4 bits (106), Expect = 9e-05
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 15/126 (11%)
Query: 41 CDKCPPGTYLKQHCTAK-WKTVCAPCP-DHYYTDSWHTSDECLYCSPVCKE--LQYVKQE 96
C CP G YLK CT + C CP D + H + EC C C E Q +
Sbjct: 48 CRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQ-ACDEQASQVALEN 106
Query: 97 CNRTHNRVCECKEGRYLEIE----------FCLKHRSCPPGFGVVQAGTPERNTVCKRCP 146
C+ + C CK G ++E + +C C + R+T C C
Sbjct: 107 CSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLCSRRDTDCGTCL 166
Query: 147 DGFFSN 152
GF+ +
Sbjct: 167 PGFYEH 172
>gi|4507569 tumor necrosis factor receptor superfamily, member 25
isoform 2 precursor [Homo sapiens]
Length = 417
Score = 45.4 bits (106), Expect = 9e-05
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 15/126 (11%)
Query: 41 CDKCPPGTYLKQHCTAK-WKTVCAPCP-DHYYTDSWHTSDECLYCSPVCKE--LQYVKQE 96
C CP G YLK CT + C CP D + H + EC C C E Q +
Sbjct: 48 CRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQ-ACDEQASQVALEN 106
Query: 97 CNRTHNRVCECKEGRYLEIE----------FCLKHRSCPPGFGVVQAGTPERNTVCKRCP 146
C+ + C CK G ++E + +C C + R+T C C
Sbjct: 107 CSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLCSRRDTDCGTCL 166
Query: 147 DGFFSN 152
GF+ +
Sbjct: 167 PGFYEH 172
>gi|224494026 tumor necrosis factor receptor superfamily, member 10b
isoform 2 precursor [Homo sapiens]
Length = 411
Score = 43.9 bits (102), Expect = 3e-04
Identities = 34/116 (29%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 44 CPPGTYLKQHCTAKWKTVCAPCP-DHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHN 102
CPPG ++ + C C Y+ W+ CL C+ C + C T N
Sbjct: 81 CPPGHHISEDGRD-----CISCKYGQDYSTHWNDLLFCLRCTR-CDSGEVELSPCTTTRN 134
Query: 103 RVCECKEGRYLE---IEFCLKHRS-CPPGFGVVQAGTPERNTVCKRCPDGFFSNET 154
VC+C+EG + E E C K R+ CP G V TP + C G T
Sbjct: 135 TVCQCEEGTFREEDSPEMCRKCRTGCPRGMVKVGDCTPWSDIECVHKESGIIIGVT 190
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,402,474
Number of Sequences: 37866
Number of extensions: 839429
Number of successful extensions: 2241
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 2001
Number of HSP's gapped (non-prelim): 248
length of query: 401
length of database: 18,247,518
effective HSP length: 104
effective length of query: 297
effective length of database: 14,309,454
effective search space: 4249907838
effective search space used: 4249907838
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.