Guide to the Human Genome
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Name: TNFRSF21 Sequence: fasta or formatted (655aa) NCBI GI: 7657039
Description:

tumor necrosis factor receptor superfamily, member 21 precursor

Referenced in:

TNF and Related Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         40           2
 C cysteine            3.7         24           1
 D aspartate           4.6         30           2
 E glutamate           6.0         39           2
 F phenylalanine       2.4         16           2
 G glycine             5.5         36           2
 H histidine           3.2         21           2
 I isoleucine          4.4         29           2
 K lysine              6.0         39           2
 L leucine             9.2         60           4
 M methionine          2.0         13           1
 N asparagine          3.7         24           1
 P proline             7.5         49           2
 Q glutamine           4.1         27           2
 R arginine            5.2         34           2
 S serine             10.4         68           3
 T threonine           7.5         49           3
 V valine              6.3         41           2
 W tryptophan          0.9          6           1
 Y tyrosine            1.5         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor necrosis factor receptor superfamily, member 21... 
TNFRSF1B              0.073   tumor necrosis factor receptor 2 precursor 
TNFRSF6B              0.069   tumor necrosis factor receptor superfamily, member 6...
TNFRSF11B             0.069   osteoprotegerin precursor 
TNFRSF6B              0.069   tumor necrosis factor receptor superfamily, member 6b...
TNFRSF9               0.047   tumor necrosis factor receptor superfamily, member 9 ...
LTBR                  0.047   lymphotoxin beta receptor 
TNFRSF14              0.040   tumor necrosis factor receptor superfamily, member 1...
TNFRSF11A             0.040   tumor necrosis factor receptor superfamily, member 11...
CD40                  0.039   CD40 antigen isoform 1 precursor 
NGFR                  0.030   nerve growth factor receptor precursor 
TNFRSF8               0.028   tumor necrosis factor receptor superfamily, member 8...
CD40                  0.022   CD40 antigen isoform 2 precursor 
TNFRSF10C             0.022   tumor necrosis factor receptor superfamily, member 1...
TNFRSF18              0.019   tumor necrosis factor receptor superfamily, member 18...
TNFRSF18              0.019   tumor necrosis factor receptor superfamily, member 1...
TNFRSF4               0.019   tumor necrosis factor receptor superfamily, member 4 ...
SSPO                  0.019   SCO-spondin 
TNFRSF25              0.017   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.017   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.017   tumor necrosis factor receptor superfamily, member 2...
TNFRSF25              0.017   tumor necrosis factor receptor superfamily, member 25...
TNFRSF10B             0.016   tumor necrosis factor receptor superfamily, member ...
TNFRSF10B             0.016   tumor necrosis factor receptor superfamily, member ...
TNFRSF10A             0.016   tumor necrosis factor receptor superfamily, member 1...
TNFRSF10D             0.015   tumor necrosis factor receptor superfamily, member 1...
TNFRSF1A              0.013   tumor necrosis factor receptor 1 precursor 
TNFRSF18              0.012   tumor necrosis factor receptor superfamily, member 1...
SCUBE3                0.009   signal peptide, CUB domain, EGF-like 3 
SEC24B                0.008   SEC24 (S. cerevisiae) homolog B isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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