COL8A2 25992

Name: COL8A2	Sequence: fasta or formatted (703aa)		NCBI GI: 32964830
Description: collagen, type VIII, alpha 2		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 42 2 C cysteine 0.4 3 1 D aspartate 2.6 18 1 E glutamate 3.4 24 1 F phenylalanine 2.0 14 1 G glycine 27.5 193 3 H histidine 1.1 8 1 I isoleucine 1.7 12 1 K lysine 4.0 28 2 L leucine 8.4 59 6 M methionine 1.3 9 1 N asparagine 1.3 9 2 P proline 20.6 145 2 Q glutamine 3.6 25 1 R arginine 3.0 21 2 S serine 3.1 22 2 T threonine 3.1 22 1 V valine 4.4 31 1 W tryptophan 0.3 2 1 Y tyrosine 2.3 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 collagen, type VIII, alpha 2 COL8A1 0.479 alpha 1 type VIII collagen precursor COL8A1 0.479 alpha 1 type VIII collagen precursor COL10A1 0.457 type X collagen alpha 1 precursor COL4A1 0.299 alpha 1 type IV collagen preproprotein COL4A5 0.296 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.296 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.290 type IV collagen alpha 5 isoform 3 precursor COL1A1 0.284 alpha 1 type I collagen preproprotein COL5A1 0.282 alpha 1 type V collagen preproprotein COL3A1 0.281 collagen type III alpha 1 preproprotein COL5A3 0.281 collagen, type V, alpha 3 preproprotein COL2A1 0.277 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.277 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL11A1 0.277 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.277 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.277 alpha 1 type XI collagen isoform A preproprotein [Ho... LOC100293055 0.274 PREDICTED: similar to COL22A1 protein COL22A1 0.273 collagen, type XXII, alpha 1 COL5A2 0.271 alpha 2 type V collagen preproprotein COL4A4 0.270 alpha 4 type IV collagen precursor COL11A2 0.270 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.270 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.270 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL27A1 0.270 collagen, type XXVII, alpha 1 COL9A3 0.267 alpha 3 type IX collagen COL7A1 0.266 alpha 1 type VII collagen precursor COL4A3 0.265 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.265 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.265 alpha 3 type IV collagen isoform 2 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.