PDCD6 35046

Name: PDCD6	Sequence: fasta or formatted (191aa)		NCBI GI: 7019485
Description: programmed cell death 6		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Calmodulin and Calcium
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 11 2 C cysteine 0.5 1 1 D aspartate 9.4 18 2 E glutamate 2.6 5 1 F phenylalanine 7.3 14 1 G glycine 8.4 16 1 H histidine 0.5 1 1 I isoleucine 6.8 13 2 K lysine 3.1 6 1 L leucine 5.8 11 1 M methionine 2.1 4 1 N asparagine 4.2 8 1 P proline 3.7 7 1 Q glutamine 7.3 14 2 R arginine 7.3 14 2 S serine 7.3 14 1 T threonine 4.7 9 1 V valine 6.3 12 1 W tryptophan 2.6 5 1 Y tyrosine 4.2 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 programmed cell death 6 PEF1 0.296 penta-EF-hand domain containing 1 SRI 0.253 sorcin isoform a SRI 0.243 sorcin isoform b GCA 0.224 grancalcin, EF-hand calcium binding protein CAPNS2 0.181 calpain small subunit 2 CAPN3 0.151 calpain 3 isoform f CAPN3 0.151 calpain 3 isoform a CAPN3 0.151 calpain 3 isoform b CAPN3 0.151 calpain 3 isoform d CAPN3 0.148 calpain 3 isoform c CAPNS1 0.146 calpain, small subunit 1 CAPNS1 0.146 calpain, small subunit 1 CAPN3 0.143 calpain 3 isoform e CAPN3 0.143 calpain 3 isoform e CAPN1 0.119 calpain 1, large subunit CAPN9 0.119 calpain 9 isoform 2 CAPN9 0.119 calpain 9 isoform 1 CAPN2 0.111 calpain 2 isoform 1 CAPN2 0.111 calpain 2 isoform 2 CALML3 0.111 calmodulin-like 3 CAPN8 0.108 calpain 8 CALML5 0.105 calmodulin-like 5 CAPN11 0.102 calpain 11 CALM3 0.092 calmodulin 3 CALM2 0.092 calmodulin 2 CALM1 0.092 calmodulin 1 LOC100292202 0.078 PREDICTED: similar to solute carrier family 25, mem... SLC25A25 0.078 solute carrier family 25, member 25 isoform b CAPN12 0.075 calpain 12 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.