Guide to the Human Genome
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Name: WBP11 Sequence: fasta or formatted (641aa) NCBI GI: 7706501
Description:

WW domain binding protein 11

Referenced in:

WW Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         42           2
 C cysteine            0.0          0           0
 D aspartate           7.2         46           3
 E glutamate           7.0         45           2
 F phenylalanine       1.9         12           1
 G glycine             7.0         45           1
 H histidine           1.2          8           1
 I isoleucine          2.8         18           2
 K lysine              7.8         50           4
 L leucine             7.3         47           2
 M methionine          3.4         22           2
 N asparagine          2.3         15           2
 P proline            18.6        119           4
 Q glutamine           4.8         31           3
 R arginine            6.7         43           3
 S serine              6.2         40           2
 T threonine           3.4         22           1
 V valine              4.2         27           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WW domain binding protein 11 
CPSF6                 0.073   cleavage and polyadenylation specific factor 6, 68 ...
FMN2                  0.069   formin 2 
PRB2                  0.065   proline-rich protein BstNI subfamily 2 
FLJ22184              0.064   PREDICTED: hypothetical protein FLJ22184 
SF3B4                 0.062   splicing factor 3b, subunit 4 
PRB1                  0.062   proline-rich protein BstNI subfamily 1 isoform 1 pre...
SETD1B                0.060   SET domain containing 1B 
DIAPH1                0.060   diaphanous 1 isoform 2 
DIAPH1                0.060   diaphanous 1 isoform 1 
YLPM1                 0.059   YLP motif containing 1 
WASL                  0.058   Wiskott-Aldrich syndrome gene-like protein 
SF3A2                 0.058   splicing factor 3a, subunit 2 
NACA                  0.057   nascent polypeptide-associated complex alpha subuni...
ZNF207                0.056   zinc finger protein 207 isoform b 
PRB3                  0.055   proline-rich protein BstNI subfamily 3 precursor [H...
ESX1                  0.055   extraembryonic, spermatogenesis, homeobox 1-like [Ho...
PRR12                 0.055   proline rich 12 
TPRX1                 0.055   tetra-peptide repeat homeobox 
WIPF2                 0.055   WIRE protein 
FLJ22184              0.054   PREDICTED: hypothetical protein LOC80164 
WASF2                 0.054   WAS protein family, member 2 
SRRM1                 0.054   serine/arginine repetitive matrix 1 
SMARCA4               0.053   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.053   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.053   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.053   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.053   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.053   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.053   SWI/SNF-related matrix-associated actin-dependent re...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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